Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00343 ATGGAAGACATCTTGGAAAGATATGAGAGACAAAACCATACAGAGCTTACTGGAGCTACCAATGAAACACAGGGAAACTGGTCTTTTGAATACATGAAGCTCACTGCTAAAGTTCAAGTCTTGGAGAGGAACTTAAGGAACTTTGTGGGCAATGATCTGGACCCTCTGAGTGTGAAAGAGCTTCAGAGTTTGGAGCAACAGCTTGACACATCGCTAAAGCGCATCCGAACAAGAAAGAACCAAGTTATGAATCAATCCATCTCAGAGCTGCATAAAAGGGCAAGGGCATTGCAGGAGCAAAACAGCAAGCTAGCAAAGACAAAGGAGAAAGAGAAGACAGTAAGTGAACATCCAAAGAGAGGCCTAGAAACCATTGGCTTAGGGCAATGTTCATCCACTCTCAACTTGATTTGTCAACCAGAGGTGCTACCACCACCACCACCACAAAGATTGGTTCCTTCTCTAAATCTAAGGGATGCTTTACAAGCAAGAGGGACATTGGAAATGGAAGAAACAGGCGAACCTCAAACTGTTCCTAGAAGCAATAATAGTCTCATTCCAGCATGGATGCTACAACATCTCACTAACTAG 591 0.4349 MEDILERYERQNHTELTGATNETQGNWSFEYMKLTAKVQVLERNLRNFVGNDLDPLSVKELQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRARALQEQNSKLAKTKEKEKTVSEHPKRGLETIGLGQCSSTLNLICQPEVLPPPPPQRLVPSLNLRDALQARGTLEMEETGEPQTVPRSNNSLIPAWMLQHLTN 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00343 196 Coils Coil 61 107 - -
Trre14g00343 196 Pfam K-box region 22 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre14g00343 196 ProSiteProfiles K-box domain profile. 24 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00343 Trre-Chr14 2725616 2728058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00343 1 192 MADS-box Gene Family AT5G60910 45.408 3.87e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00343 K09264 - gmx:100788956 226.483