Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00332 ATGGGTTTTTCTTTGTTATCAAAAACAACTCCTTGCATTTTATTCTTCATTCTACTTTCTTCCACTTACTTCACTTCAACAGATGCTTATGACCCACTTGACCCAAACGGGAATATCACAATCAAATGGGACGTTGTGCAATGGACACCTGATGGTTATATGGCTGTTGTTACGATGACCAACTTCCAACAATATCGACACATTGCTGCGCCTGGTTGGTCCCTAGGATGGACCTGGGCGAAAAAAGAGAACCCTACAGTTGTTGATTTTCTTCCGGGAACACCTTATAATCAGCAAGTCGCGAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGCACAGGATCCTACCAATGCAGTGGCGTCATTTCAGATCAGTGTTGGTAGGGCTGGAACCACAAATAAAACGGTTAAAGTCCCTAAAAACTTCACCTTGAAAGCACCGGGGCCCGGTTATACCTGTGGGCCGGCAAAAATTGTGAGACCTACTCAGTTTCTTCAGCCAGATAAACGGAGAGTAACACAAGCACTCATGACTTGGAATGTTACGTGCACGTATTCTCAATTTCTTGCACAGAAAACTCCCACTTGTTGCGTGTCCCTTTCAGCCTTCTATAACGAAACAATTGTACCCTGCCCAACTTGTGCATGTGGATGCCAGAGTAACTCATCGCAGTCGGGTAGTTGTGTAAATCCAAATACGCCACATTTAGCCTCGGTTGTTGCTGGTGACGGAAAGAATAATTTATCACCTTTGGTGCAATGTACCAGCCATATGTGCCCAATCCGAATCCATTGGCATATCAAAGTGAACTACAAGGAATACTGGCGTGTGAAGGTTTCTATAACTAATTTTAATTACCATATGAATTACTCCAACTGGAACTTGGTAGTCCAGCATCCAAACTTCGATAATCTGACCCAGTTATTCAGTTTCGACTACAAGTCATTAAATCCTTATGGTACAATAAATGATACAGCAATGTTGTGGGGAGTGAAGTTCTATAATGATTTTCTTAATCAGGCTGGCCCTAATGGCAATGTTCAATCTGAGGTACTCTTCCGAAAGGATGATATGTCAACTTTCAGTTTTGGAAAGGGTTGGGGTTTCCCTCATAGAGTCTACTTCAACGGCGACAACTGTGTGATGCCACCGCCCGATGCGTATCCATGGTTACCTAATGCCGGTTCTCGGCAAGAGGTTTCATTGTTTGCTTTAGTAATTGCCTCCTTGGTAGTCTTAGCATTTTATGCATACATTTAA 1263 0.4323 MGFSLLSKTTPCILFFILLSSTYFTSTDAYDPLDPNGNITIKWDVVQWTPDGYMAVVTMTNFQQYRHIAAPGWSLGWTWAKKENPTVVDFLPGTPYNQQVANCCKGGVLSSWAQDPTNAVASFQISVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVRPTQFLQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSAFYNETIVPCPTCACGCQSNSSQSGSCVNPNTPHLASVVAGDGKNNLSPLVQCTSHMCPIRIHWHIKVNYKEYWRVKVSITNFNYHMNYSNWNLVVQHPNFDNLTQLFSFDYKSLNPYGTINDTAMLWGVKFYNDFLNQAGPNGNVQSEVLFRKDDMSTFSFGKGWGFPHRVYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVIASLVVLAFYAYI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00332 420 Pfam COBRA-like protein 53 83 IPR006918 GO:0010215|GO:0016020
Trre14g00332 420 Pfam COBRA-like protein 83 187 IPR006918 GO:0010215|GO:0016020
Trre14g00332 420 PANTHER PROTEIN COBRA 82 409 IPR006918 GO:0010215|GO:0016020
Trre14g00332 420 PIRSF COBRA 82 420 IPR006918 GO:0010215|GO:0016020
Trre14g00332 420 PIRSF COBRA 3 84 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00332 Trre-Chr14 2566918 2570557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00332 1 414 COBRA Gene Family AT3G02210 66.370 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00332 - - gmx:100783820 765.377