Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00331 ATGGGTTTTTCTTTGTTATCAAAAACAACTCCTTGCATTTTATTCTTCATTCTACTTTCTTCCACTTACTTCACTTCAACAGATGCTTATGACCCACTTGACCCAAACGGGAATATCACAATCAAATGGGACGTTGTGCAATGGACACCTGATGGTTATATGGCTGTTGTTACGATGACCAACTTCCAACAATATCGACACATTGCTGCGCCTGGTTGGTCCCTAGGATGGACCTGGGCGAAAAAAGAGAAGAACCCTACAGTTGTTGATTTTCTTCCGGGAACACCTTATAATCAGCAAGTCGCGAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGCACAGGATCCTACCAATGCAGTGGCGTCATTTCAGATCAGTGTTGGTAGGGCTGGAACCACAAATAAAACGGTTAAAGTCCCTAAAAACTTCACCTTGAAAGCACCGGGGCCCGGTTATACCTGTGGGCCGGCAAAAATTGTGAGACCTACTCAGTTTCTTCAGCCAGATAAACGGAGAGTAACACAAGCACTCATGACTTGGAATGTTACGTGCACGTATTCTCAATTTCTTGCACAGAAAACTCCCACTTGTTGCGTGTCCCTTTCAGCCTTCTATAACGAAACAATTGTACCCTGCCCAACTTGTGCATGTGGATGCCAGAGTAACTCATCGCAGTCGGGTAGTTGTGTAAATCCAAATACGCCACATTTAGCCTCGGTTGTTGCTGGTGACGGAAAGAATAATTTATCACCTTTGGTGCAATGTACCAGCCATATGTGCCCAATCCGAATCCATTGGCATATCAAAGTGAACTACAAGGAATACTGGCGTGTGAAGGTTTCTATAACTAATTTTAATTACCATATGAATTACTCCAACTGGAACTTGGTAGTCCAGCATCCAAACTTCGATAATCTGACCCAGTTATTCAGTTTCGACTACAAGTCATTAAATCCTTATGGTACAATAAATGATACAGCAATGTTGTGGGGAGTGAAGTTCTATAATGATTTTCTTAATCAGGCTGGCCCTAATGGCAATGTTCAATCTGAGGTACTCTTCCGAAAGGATGATATGTCAACTTTCAGTTTTGGAAAGGGTTGGGGTTTCCCTCATAGAGTCTACTTCAACGGCGACAACTGTGTGATGCCACCGCCCGATGCGTATCCATGGTTACCTAATGCCGGTTCTCGGCAAGAGGTTTCATTGTTTGCTTTAGTAATTGCCTCCTTGGTAGTCTTAGCATTTTATGCATACATTTAA 1266 0.4321 MGFSLLSKTTPCILFFILLSSTYFTSTDAYDPLDPNGNITIKWDVVQWTPDGYMAVVTMTNFQQYRHIAAPGWSLGWTWAKKEKNPTVVDFLPGTPYNQQVANCCKGGVLSSWAQDPTNAVASFQISVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVRPTQFLQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSAFYNETIVPCPTCACGCQSNSSQSGSCVNPNTPHLASVVAGDGKNNLSPLVQCTSHMCPIRIHWHIKVNYKEYWRVKVSITNFNYHMNYSNWNLVVQHPNFDNLTQLFSFDYKSLNPYGTINDTAMLWGVKFYNDFLNQAGPNGNVQSEVLFRKDDMSTFSFGKGWGFPHRVYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVIASLVVLAFYAYI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00331 421 PIRSF COBRA 3 84 IPR006918 GO:0010215|GO:0016020
Trre14g00331 421 PIRSF COBRA 83 421 IPR006918 GO:0010215|GO:0016020
Trre14g00331 421 PANTHER PROTEIN COBRA 83 410 IPR006918 GO:0010215|GO:0016020
Trre14g00331 421 Pfam COBRA-like protein 83 188 IPR006918 GO:0010215|GO:0016020
Trre14g00331 421 Pfam COBRA-like protein 53 83 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00331 Trre-Chr14 2566918 2570557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00331 1 415 COBRA Gene Family AT3G02210 66.592 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00331 - - gmx:100783820 767.689