Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00327 ATGGTGCCTAAACTATCAGATTTTTGGATTTCCTTGCAAAGTCCTTTGTTTACTTCAATCCCAAAACCAAAGTCCATATTAAATGATAACATTGTTGGTTCATATGGTTATGTGGCCCCTGAGATTTTAGAAAACAGTAAAGCAACATATAAGTGCGATGCTTACTCTTTCGGTATACTTCTACTAGAAGTGGTATGTTGCGAAAAGTTAGAAAATGTTAAGAGACAGAGACTGCCAATGGAAGAGAATATTGATGAGAATATCAAAGGAAACATTGCACCAGAATGTTGGGAAATATTTGTGGATGTCACAAAAAGATGTTTAAAGTATGATCCAAATGAACGACCAACAATGGGTGAAGTGGAGGTGCAACTTGAACTTGCTCTATCACTGCAGGAAAAAGCAGATAATAACAAAAACACCAATGTTGATGATGATCATTATATACTATCATCTACAACCATTATTGATGAATAA 477 0.348 MVPKLSDFWISLQSPLFTSIPKPKSILNDNIVGSYGYVAPEILENSKATYKCDAYSFGILLLEVVCCEKLENVKRQRLPMEENIDENIKGNIAPECWEIFVDVTKRCLKYDPNERPTMGEVEVQLELALSLQEKADNNKNTNVDDDHYILSSTTIIDE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00327 158 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
Trre14g00327 158 SUPERFAMILY Protein kinase-like (PK-like) 2 130 IPR011009 -
Trre14g00327 158 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00327 158 PANTHER OS07G0166700 PROTEIN 1 132 IPR045272 GO:0004714|GO:0006468
Trre14g00327 158 Pfam Protein kinase domain 4 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00327 Trre-Chr14 2522929 2524105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00327 2 138 Receptor kinase-like Gene Family AT3G51550 32.895 3.89e-20 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Trre14g00327 Pkinase 3.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00327 - - gmx:100775244 201.83