Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00325 ATGCTTGTAAAATATTCGAAGCATAAAAGTTCATCCAAGAAACAATATTCAACAGTTATAGAAGAGCTATGCCATCAATTTTCTCTAGAAGATTTGAAGAAATCGACTAATAACTTTGATGAAGAGCGGATAATTGGACGAACAGAATTCAGTATAGTGTACAAAGGTTATCTCAAACATAATGGTGAAACTGATTATCCAATTGCATTGAAACGGATGAGAAATATATTTGACGAATGGAAGTTCAATAAGGAAATTGAACTTCACTGCCAGCTTCATCACCCGAATTTGACATCTTTAATAGGATTCTGTGACCAAAAATATGAGAAAATTATCGTGTATGAATACATGTTAAATGGCTCTCTCTATAATCATTTACGTTTAAGGGATATGGAATCACTGTCATGGAAGAAAAGGCTTGAAATATGCATTGGAGCTGCAAAAGGACTACACTACCTTCACACTGGAGCAAAACGAGCAATTTTTCACTGTGACATAAAGCCTCAAACCATTCTTTTAGATAATAGTATGGTACCAAAACTCTCGCATCTTGGATTTTCCTTACAAGGGAAGCTTTCTAAGTCGAATCCAAAACCAATTAAAGTCGACATCCTTATTGGTACATTTCGTTACATGGCGCCAGAGTGTCTCTTAACCAACACTTTCACAGATAAATGTGATGTTTATTCCTTTGGTATAGTTCTACTTGAAGTAGCATGCACAAACTACAAGAATACCATCTTTGATAAGATGATCATGTTAGAGGACACAGATATGTTTTCAAATCAGTCATTTAATCCAGCTAACTTTCTGGAGAGGTTTCCAGCTAATGAGATTATTGATCCAATTCTCATGAGATTGATTGCACCAAAATGTTTGGTAGTGTTCATGGATATCATGAAAAGATGCTTGAATATAGAACCAAACGAACGACCAACAATGGGCGAGATTGAGGTTGAACTTGAGCATGCTTTGGCACTGCAGCAGGAAGCAGATGATGGGAAAAGTAATGGTGATTTTAACTTTTCTCCAACCACCATTTCAACCTAA 1050 0.359 MLVKYSKHKSSSKKQYSTVIEELCHQFSLEDLKKSTNNFDEERIIGRTEFSIVYKGYLKHNGETDYPIALKRMRNIFDEWKFNKEIELHCQLHHPNLTSLIGFCDQKYEKIIVYEYMLNGSLYNHLRLRDMESLSWKKRLEICIGAAKGLHYLHTGAKRAIFHCDIKPQTILLDNSMVPKLSHLGFSLQGKLSKSNPKPIKVDILIGTFRYMAPECLLTNTFTDKCDVYSFGIVLLEVACTNYKNTIFDKMIMLEDTDMFSNQSFNPANFLERFPANEIIDPILMRLIAPKCLVVFMDIMKRCLNIEPNERPTMGEIEVELEHALALQQEADDGKSNGDFNFSPTTIST 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00325 349 Pfam Protein tyrosine and serine/threonine kinase 42 320 IPR001245 GO:0004672|GO:0006468
Trre14g00325 349 ProSiteProfiles Protein kinase domain profile. 39 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00325 349 Gene3D Transferase(Phosphotransferase) domain 1 117 342 - -
Trre14g00325 349 FunFam Receptor-like protein kinase ANXUR2 5 116 - -
Trre14g00325 349 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
Trre14g00325 349 SUPERFAMILY Protein kinase-like (PK-like) 12 320 IPR011009 -
Trre14g00325 349 PANTHER OS07G0166700 PROTEIN 23 328 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00325 Trre-Chr14 2518289 2519941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00325 10 331 Receptor kinase-like Gene Family AT5G38990 40.673 2.03e-63 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre14g00325 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00325 - - mtr:25497582 521.546