LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre14g00319	ATGGCAAATTCAATAAACCAAAAAATTCTCACACAAATGACCATACTATCTCTCATTTTGCTACTGTACCCTCTAGTTACTAACTCATACAACCCAATTTACAATTTAGCTATCAATTGTGGCACCTCAAAAAACACTACTTCCTTAGACAATCGAATTTGGGTTGGTGATGATATTGAAAACTCCAATCTCCTTACCTTCACAGAACCAAAAACCACAAACCAATCTTTTAACACAAAGCCTATTTCCGTCGCAAATACTCAAATTCCATTCACAACCGCACGTGTCTCACTCTCAAATTTCACATACTCTTTTCCTATAAATATCACTAATTCCCCTGTTTTTATTCGCCTTCATTTTTACCCAACATCATATCAAAACTTTGAACTTTCTAATGCAATTTTTTCTGTTGAAGTAAATAACAACCTCACTCTTCTTAAAAACTTCAACCCTTTAAATTGGGCTCAGGACAGTTCAATCACCAAAGAATATTGCATCCAAATCAAACAAAATGAGAATTTGCTAAACATAACTTTCATTCCAAGCAACATAAACCAATCAAATGTTTATTATGCTTTTGTTAACGGAATCGAAGTTGTGTCTATGCCTTCTTTTCTCTATTACTCAGACTTTGATGACATCAATTATCGTATCAGATCAGTTGACACAGGTACCACAGATTACAAAATTCAAAACGACAAAGCTTTGGAGATGGTTTATAGAGTCAACGTTGGTCAAAATCAAGTTCCACCAAATAATGATACAGGTATGTTTCGTAATTGGGATATCGATTATCCTCTTTACTTGAAGAAACAATATCTACATAGCATATCTAGTGGTTATGGAGAACATCTAAACTATTTAAACAACACCGTTGCGAATTACACTGCACCAGAAGATGTTTACTTAACTGGAAGAAATTATGGAAACGATGCGAAAGAAGAATATAATGTAACTTGGAGTTTTGAAGTTGATTCTACTTTTACTTATATGATAAGGTTACATTTTTGTGAGTTTGATAAGGATATAAAAAGCCAAGGTTATAGAGTTTTTCAGATTTTTATAGATGATATTTTGGCTGAACAAGGTGCTGATGTGTTTTCATGGAGTGGTGGTCTATTGATTCCTGTTCATAAGGATTATGTTGTGACTATGTACTCTCCAAAAGGAAGCTCTCAAATTGAAAGAGTTAATATTTCAATCAAGCTTCAACGCATGCCAGAACATTCGATACTCACAACAGCATATCGCGATGTCTTATTGAATGGAATCGAGATTTTTAAGATAAGTGACAACAATAAAAATCTTGCAGGAGTGAATCCCAAATATTTACCTCCAAATGAACCATTATTACCTAGTCCACAATCAAAGTCGAAGAACTCAACCGTAATAATTTTTATTGCGGTTGGAATTTCATGTCTCTTGTTAGCATCTGTTGTTGGAATGATAGTTTTCGTTCGAAGGAGGAGAAAATTTGAATCTCATCTTGAAATCAAAGAAAGTTCATGGGAGACTAAGACAGAAGGTACGTCAATTTTACCATCCCATTTGTGTCGCTATTTTACAATAGCAGAGATAAGAGCTGCTACAAACAACTTTGATGATATTTTTATCATTGGGGTTGGAGGGTTCGGCAACGTGTACAAAGGTTACATAGATGGAGTTACACCTGTTGCGATAAAACGTCTTAAACCGGGTTCTCAACAAGGTATTAACGAGTTCATGAATGAGATAGAGTTGCTCTCTCAACTTCGTCATATTCACTTGGTTTCTCTTATTGGATATTGCAATGAAGGTGCAGAGATGATTCTCGTTTACGACTTTATGCAACGTGGCACTCTTCGTGAATATTTATATGGTTCAGATAACGAACTTCTTACTTGGAAGAAGAGGCTCGAGATTCTATTGGGTGCGGCAAGGGGGTTACATTATCTCCATACAGGTGCGAAACAAAATATCATACATCGGGATGTTAAGAGTACCAACATACTGTTGGATGAGAAATGGGTGGCTAAGGTTTCTGATTTCGGTTTATCAAAAGTGGGACCAATAGGAATCTCGATGACGCACGTCAGCACCGTGGTGAAGGGTAGTCTTGGGTATTTGGATCCTGAATACTACATGCGTCAAAGGTTGACTCTAAAATCTGACGTGTACTCTTTTGGTGTTGTGCTTCTTGAGGTATTGTGCGCAAGACCTCCTTTGGTTCGTTCTTCGGATAAGAAAACAGCGAGTTTGGTCGTTTGGTTCCAAAAATGTTACAAGGAAGATTTGATAATGGAAGAGATGGTGGACCCGTTCATAAAGGATTCTATAACAAGTGAGTGTTTGAAATCTTATTGTCAAATGGTGTTGAGTTGCTTGCATGATGATGGAAATCAACGGATGTCGATGAGCGATGTGGTTGGGGCATTAGAGTTTGCATTGGAACTTGTGATGGGCGAGGAGGATAGTAAGTTTAGTGAGACCGGAGAAAATGAAAAAAGTGCACAAAGGCTACGGTTGCCACAGTTTACGAGTGATGATGGGAGTGACAAATGTTTCACGAGTAGTAGTGATGACTATGGGTCTCATACCAGTAAAGTAAGCACCATTTCAGCCAGTACTGAAGATCAACCATTGTTTTCTGGTTCTGCATTTTCTGAGATTGGGAACCCAAGAGCACGATAG	2670	0.3727	MANSINQKILTQMTILSLILLLYPLVTNSYNPIYNLAINCGTSKNTTSLDNRIWVGDDIENSNLLTFTEPKTTNQSFNTKPISVANTQIPFTTARVSLSNFTYSFPINITNSPVFIRLHFYPTSYQNFELSNAIFSVEVNNNLTLLKNFNPLNWAQDSSITKEYCIQIKQNENLLNITFIPSNINQSNVYYAFVNGIEVVSMPSFLYYSDFDDINYRIRSVDTGTTDYKIQNDKALEMVYRVNVGQNQVPPNNDTGMFRNWDIDYPLYLKKQYLHSISSGYGEHLNYLNNTVANYTAPEDVYLTGRNYGNDAKEEYNVTWSFEVDSTFTYMIRLHFCEFDKDIKSQGYRVFQIFIDDILAEQGADVFSWSGGLLIPVHKDYVVTMYSPKGSSQIERVNISIKLQRMPEHSILTTAYRDVLLNGIEIFKISDNNKNLAGVNPKYLPPNEPLLPSPQSKSKNSTVIIFIAVGISCLLLASVVGMIVFVRRRRKFESHLEIKESSWETKTEGTSILPSHLCRYFTIAEIRAATNNFDDIFIIGVGGFGNVYKGYIDGVTPVAIKRLKPGSQQGINEFMNEIELLSQLRHIHLVSLIGYCNEGAEMILVYDFMQRGTLREYLYGSDNELLTWKKRLEILLGAARGLHYLHTGAKQNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPIGISMTHVSTVVKGSLGYLDPEYYMRQRLTLKSDVYSFGVVLLEVLCARPPLVRSSDKKTASLVVWFQKCYKEDLIMEEMVDPFIKDSITSECLKSYCQMVLSCLHDDGNQRMSMSDVVGALEFALELVMGEEDSKFSETGENEKSAQRLRLPQFTSDDGSDKCFTSSSDDYGSHTSKVSTISASTEDQPLFSGSAFSEIGNPRAR	889

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre14g00319	889	Pfam	Malectin-like domain	38	429	IPR024788	-
	Trre14g00319	889	ProSiteProfiles	Protein kinase domain profile.	533	808	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre14g00319	889	FunFam	FERONIA receptor-like kinase	35	203	-	-
	Trre14g00319	889	MobiDBLite	consensus disorder prediction	818	889	-	-
	Trre14g00319	889	FunFam	FERONIA receptor-like kinase	234	430	-	-
	Trre14g00319	889	MobiDBLite	consensus disorder prediction	830	879	-	-
	Trre14g00319	889	Gene3D	-	234	430	-	-
	Trre14g00319	889	Gene3D	-	34	203	-	-
	Trre14g00319	889	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	653	665	IPR008271	GO:0004672\|GO:0006468
	Trre14g00319	889	FunFam	Receptor-like protein kinase FERONIA	609	828	-	-
	Trre14g00319	889	SMART	serkin_6	533	808	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre14g00319	889	FunFam	receptor-like protein kinase FERONIA	496	608	-	-
	Trre14g00319	889	Gene3D	Phosphorylase Kinase; domain 1	494	608	-	-
	Trre14g00319	889	SUPERFAMILY	Protein kinase-like (PK-like)	510	807	IPR011009	-
	Trre14g00319	889	Pfam	Protein tyrosine and serine/threonine kinase	539	804	IPR001245	GO:0004672\|GO:0006468
	Trre14g00319	889	Gene3D	Transferase(Phosphotransferase) domain 1	609	827	-	-
	Trre14g00319	889	PANTHER	OS03G0124300 PROTEIN-RELATED	14	498	IPR046957	GO:0004672
	Trre14g00319	889	CDD	STKc_IRAK	539	806	-	-
	Trre14g00319	889	ProSitePatterns	Protein kinases ATP-binding region signature.	539	561	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre14g00319	Trre-Chr14	2484020	2486689	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre14g00319	30	889	Receptor kinase-like Gene Family	AT3G51550	44.629	0.0	644

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Trre14g00319		Malectin_like	3.2e-33	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre14g00319	-		-	mtr:25497555	1019.99