Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00308 ATGGCTAACTACCTAAAGAAAAAGAACATATTTCCTAGTGAAATCACCCTGTTGTCTATGGTTTTGTTTCTCCACCTATTGTTTCCTCTAGTGGTTAACTCATATGATAATTTAGCCGTGAATTGTGGCCACTCCATTGATACTATTTTTGAAAATCGAAAATGGGTTGGCGATGTTGAAGATTCTAAACTGTTCTCTATCATTGAACCACAAATCGGACACGGATCTATAAAAGCCGAAGCAAATCTTAACTCTGATTTTGTAAACCAAATTCCGTTTGCCTCAGCACGTATTTCTTTTTTCAATTTCACATTCTCATTTCCTAGTGTTATCGTCAATAGCGATACTGTTTTTATTCGCCTCCATTTTTACCCAACATGGTATCAAAACTTTGAGACCTCCAATGCACTTTTCACAGTTAAAGTAGGAAAGCTTACCCTTCTCAAAGACTTTAACCCCTCACTTTGGCTTCAAAATGATAAGAAGACAATCACCAAAGAATATTGCCTCACAACGAAACAAGGTGAGAAGCTAAACATAACTTTCATTCCCAGCATCACAAATCAATCAAAAGCTTATGCTTTCATCAACGGAATCGAGATTGTGTCTATGCCTTCTTTTCTCTATTACACTAACCTCGACGACCCAAATTATCATTTCAAGTTACTTGGCTTGGAAAACAAGAAATACAAAATTCATCGGGACAAAGCTTTGGAAACGGTTTATAGAGTCAGTGTTGGTGGTAATCAAGTTTCACCAAGTAATGATACAGGTATGTTTCGTTATTGGGACAATGATTTTCCTCGTTACTTGGAGACACAATATCCGCTAAGTGTATCAAGTGATTTTGAACATAATCTAAACTATGTAAACAATACCATTCCAAATTACACTGCACCAGAAGTTGTATACTTAACTGCAAGAAGTTATGGGATTGATGCGGCAAAGGATTATAACGTAACTTGGAATTTTGAAGTCGATTCTAATTTTACTTATTTGGTAAGGTTACATTTTTGTGAGTTTGATTGGCTTATAAAGAATAAAAGTGATAGGGTTTTTCAGATTTTTATAGATGATACTTTAGCTGAACGAAATGCTGATGTTATTTATTGGAGTGGTGCTCATATGGTTCCTGTTCATAAGGATTATGCTGTGATAATGAACTCTCATGAAGGAAGCTCTCAAATTAAAAGAGTTAACCTTTCAATCAAGCTACAACGAGTACCAGAAAACATCAATACAAGATACCGTAATGTCACACTGAATGGAATCGAGATTTTGAAAATAAGTGACAAAAATAACAATCTCGCGGGATCAGTATCAAAATCCGTTGATCTATCTCACCCACATCAAGCATTGTCAACCAAAACTTCAAAAACATTTAAGATAATCTTAGCTGTTGTTGAGTCCACAATAGCTTCCGTTAGTGTATTTGCGGTGGGTTTCGCAATGTTCTGGTTAAGGGGAGGGCTTCCGGATTCTATGGATGATAACTTGTCGATGACAAACAGTGAAGGGTCACCATCTTTGCCTCCCCATTTGTGTCGCTACTTTACAATTGCAGAGATAAAGGCAGCCACAAACAACTTTGATGATGTTTTCATCATTGGAGTTGGAGGGTTTGGTAATGTGTACAAAGGTTTCATCGATGAATCAACACCTGTTGCAATAAAACGCCTCAAACCAGGCTCTCAACAAGGTGTCAACGAGTTCATGAACGAGATCAAGTTGCTTTCTCAACTTCGCCACATTCACTTGGTATCCCTTGTTGGATATTGCAACGACAATAAAGAGATGATTTTGATTTATGAGTTCATGCACCATGGTACTCTATGCGAGTATCTATATGGTTCCAATAACAAGCCCCTATTATGGAAGCAGAGGCTTGAGATCCTACTCGGTGCAGCGAGAGGGCTGCATTATCTTCATGCTGAGGTGAAAGACAAGATAATACATCGTGACGTGAAGAGCACCAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCCGACTTCGGGTTATCCAAGGTGGGACCCACAGGAATATCAACTACCCACGTCAGCACGATGGTGAAGGGGAGCCTGGGGTACTTAGATCCCGAGTACTATATGCTCCAAAGGCTTACTCTAAAATCTGATGTGTACTCATTCGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGGCCGCCTTTGGTTCGTGATTTAGATAAAAAGACAGCTAGTCTAGTTTGTTGGTTTCAAACATGTTACAATGAAGGTGTGGCAATTAAAAAGATAGTGGATCCATTTTTAAGGGATTCTATCACAGATGAGTGTTTGAAATATTATTGCAAGTTAGCCTTGAGTTGTTTGCATGACGATGGGACTCAACGACCTTCAATGACTCAAGTTGTTGGGGGTTTAGAGTTTGTGTTACAGTTAGTGGTGAGTGAGGAGGATAGCCAGTTCGGTACGACCCAAAAAGAGAGAACATGTACGGAAAGTCTATGGTTCTCACAATTTTTGAGTGATGAAGGGAGTGATTTGCATTTCCCTAGATCCCACACCTACAAGGAGACCACGGTCTCAGCAAGAGCAAGAACTCATGACCATTCTTTCTCCGAGATTGAGAATCCAAGACCACGATCGTATTCATGCCAAAACTTCCAACTTTATAATTAA 2664 0.3908 MANYLKKKNIFPSEITLLSMVLFLHLLFPLVVNSYDNLAVNCGHSIDTIFENRKWVGDVEDSKLFSIIEPQIGHGSIKAEANLNSDFVNQIPFASARISFFNFTFSFPSVIVNSDTVFIRLHFYPTWYQNFETSNALFTVKVGKLTLLKDFNPSLWLQNDKKTITKEYCLTTKQGEKLNITFIPSITNQSKAYAFINGIEIVSMPSFLYYTNLDDPNYHFKLLGLENKKYKIHRDKALETVYRVSVGGNQVSPSNDTGMFRYWDNDFPRYLETQYPLSVSSDFEHNLNYVNNTIPNYTAPEVVYLTARSYGIDAAKDYNVTWNFEVDSNFTYLVRLHFCEFDWLIKNKSDRVFQIFIDDTLAERNADVIYWSGAHMVPVHKDYAVIMNSHEGSSQIKRVNLSIKLQRVPENINTRYRNVTLNGIEILKISDKNNNLAGSVSKSVDLSHPHQALSTKTSKTFKIILAVVESTIASVSVFAVGFAMFWLRGGLPDSMDDNLSMTNSEGSPSLPPHLCRYFTIAEIKAATNNFDDVFIIGVGGFGNVYKGFIDESTPVAIKRLKPGSQQGVNEFMNEIKLLSQLRHIHLVSLVGYCNDNKEMILIYEFMHHGTLCEYLYGSNNKPLLWKQRLEILLGAARGLHYLHAEVKDKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMLQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKKTASLVCWFQTCYNEGVAIKKIVDPFLRDSITDECLKYYCKLALSCLHDDGTQRPSMTQVVGGLEFVLQLVVSEEDSQFGTTQKERTCTESLWFSQFLSDEGSDLHFPRSHTYKETTVSARARTHDHSFSEIENPRPRSYSCQNFQLYN 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00308 887 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Trre14g00308 887 Gene3D - 37 205 - -
Trre14g00308 887 Gene3D - 236 430 - -
Trre14g00308 887 ProSiteProfiles Protein kinase domain profile. 530 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00308 887 FunFam FERONIA receptor-like kinase 37 205 - -
Trre14g00308 887 CDD STKc_IRAK 536 799 - -
Trre14g00308 887 FunFam receptor-like protein kinase FERONIA 494 605 - -
Trre14g00308 887 FunFam Receptor-like protein kinase FERONIA 606 824 - -
Trre14g00308 887 Pfam Protein tyrosine and serine/threonine kinase 536 799 IPR001245 GO:0004672|GO:0006468
Trre14g00308 887 Gene3D Transferase(Phosphotransferase) domain 1 606 825 - -
Trre14g00308 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Trre14g00308 887 PANTHER OS03G0124300 PROTEIN-RELATED 18 482 IPR046957 GO:0004672
Trre14g00308 887 Gene3D Phosphorylase Kinase; domain 1 498 605 - -
Trre14g00308 887 FunFam FERONIA receptor-like kinase 236 430 - -
Trre14g00308 887 SUPERFAMILY Protein kinase-like (PK-like) 500 803 IPR011009 -
Trre14g00308 887 SMART serkin_6 530 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00308 887 Pfam Malectin-like domain 42 428 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00308 Trre-Chr14 2390240 2392903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00308 36 818 Receptor kinase-like Gene Family AT3G51550 44.663 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre14g00308 Malectin_like 2.4e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00308 - - mtr:25497555 1263.06