Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00292 ATGAATAATAATTCAAAAGAAGCTGAATTTCCATTGAAACAAGAAGTTCATCCTAATTCAAATGATCAACATGAAAAAGAGAAGGCTTCACCATCATCAAGTTCCTTAGCTTCATCTTCACAATGGCCAAGATTGAAAGATCCAAGAATTGTTAGAGTATCAAGAGCCTTTGGTGGAAAAGATAGACATAGCAAAGTTTGCACAATGAGAGGATTAAGAGATAGGAGAGTAAGACTTTCAGTTCCAACAGCTATTCAACTTTATGATCTTCAAGATAGATTAGGGCTTAATCAACCTAGCAAAGTTGTTGATTGGTTGCTTAATGCAGCTAAACAAGAAATTGATCAACTTCCACCACTTCCTAATTTTCCACCTATTGGAACAAATTTCAATTTTGGTTTTCCATCTTCTATTGAACCCAACACCGACACTTCTCATCTTCATCAACAATTGTTGAATTTCAATAGGAACAATATTCAATGGGAAGGTTCAAGTTCAAGTCAAAATTCTAGTTGGAAATTAAACCCTAAAGAAGTTTCAAGAGAAATGGTTAGTGAAAAACCAAATTATTGGATGAATAGAAGTACTCAAGAAGAGGAAAATAACAAACAAGGAAGCAATATTGAAGGAGGAAATATTGGTTTAATTACAAACCAAACCAATGATGGTAATGCAATTACATCTTTGCCACCAATGTTGTCTTTATCAACTGGAAATTCTTCTCAAATGTTGTTAGGAACAACACAATCATATTTTTCTTCAAATGTTAATGAAATGGAGATGGATCATCATCAAAGACAAATCAACAATCATTATCATCAAATATTGAGTTCTTCAAATTCTCAAAATCCATTGAATAATTCTCTTAACAATCCTTCCTTTAGTTTGGCTATGATGAGTACTCCCAAGTTTCTACAAAGCAGCAGAGAAAATACATCAAATAAAGAACAAGATTTCACTCCAAAGTGA 969 0.3282 MNNNSKEAEFPLKQEVHPNSNDQHEKEKASPSSSSLASSSQWPRLKDPRIVRVSRAFGGKDRHSKVCTMRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKQEIDQLPPLPNFPPIGTNFNFGFPSSIEPNTDTSHLHQQLLNFNRNNIQWEGSSSSQNSSWKLNPKEVSREMVSEKPNYWMNRSTQEEENNKQGSNIEGGNIGLITNQTNDGNAITSLPPMLSLSTGNSSQMLLGTTQSYFSSNVNEMEMDHHQRQINNHYHQILSSSNSQNPLNNSLNNPSFSLAMMSTPKFLQSSRENTSNKEQDFTPK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00292 322 ProSiteProfiles TCP domain profile. 59 117 IPR017887 -
Trre14g00292 322 MobiDBLite consensus disorder prediction 10 29 - -
Trre14g00292 322 Pfam TCP family transcription factor 59 199 IPR017887 -
Trre14g00292 322 MobiDBLite consensus disorder prediction 195 216 - -
Trre14g00292 322 MobiDBLite consensus disorder prediction 1 43 - -
Trre14g00292 322 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 286 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00292 Trre-Chr14 2297713 2298837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00292 42 131 TCP Transcription Factor Family AT3G02150 80.000 8.28e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre14g00292 TCP 7.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00292 - - gmx:100816424 279.641