Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00287 ATGACCAAAATCATAGAAACTCTCAATGTATCACCATCTTCAAAAGAACAATTACCTTCACAAACATCACTTCCTCTCACCTTTTTTGACATACTTTGGTTAAGATTACCACCTGTTCAAAGAATTTTCTTCTATGAATTTCCACACCAACCCTCACTTTTCTTCAATACCCTTCTTCCAAAACTCAAAAAATCACTTTCTCATACTCTTTTTCACTTTTATCCTCTTTTGGGTCATCTCATTTGGCCTATTGATTATCACAAACCTATTGTCAAACATGTTATAGGCAACACTCTTTTGCTTACAGTAGCGGAATCCGATGCTGATTTCAATCATTTATCTGGTAATAATCTTTGTGAAGCTTCACAAATTCATGATCTTTTACCTAACTTGAATATTTCTCATGATCAAGCTTCTGTTTTGGCTCTTCAAGTTACTCTTTTTCCAAACTATGGTTTTTCTATTGGTATTACTTCACATCATGCTGTTTTAGATGGTAAAACTTCAACTTCTTTTATCAAATCTTGGGCTTATTTATGTAATAAGCTTGAAAGTGGAGAATCTGAATCAAAATCTGAATTAGAATCACCCCTTTTATTGCCAGCTGAATTTGTTCCTTTCTTTGATAGAAAACTAATCAATGATCCAAATGGGATAGAAGAAAAATATGTGAGTGTTTGGTTAAAGCAAGGTGGAACAAACAATATAAGCTTAAAGGTTTGGGATCTTGAAGTTCCTGAAGAGTCAACTAGAGGATTGTTTCAGTTAACTCGGTTGGATATCGAAAAGCTTAAGGAGTTTTTAGTGTCAAAACAAAAGGGTAGGAATGAAAATAAGAAACTTCATTTGTCAACTTTTGTGGTATCTATTGCATATGCATGGGTATGCAGAGTGAAAGCAGAGGAAATTGAGAAGAAAAATGTTATGCTGGCTGTGAATATCGATTGCAGGAATCGGTTGGATGGATCGGTTCCAGCAACATATTTTGGAAATTGTATTGGAGCAAGAATAACAATAGTTGAAACAAGTAAGTTATTGGGAGAAGATGGACTAATTGTGGCTGTTGAGGTGATGAGTGAAGCTTTGGAAACTCTCAAAGATGGAGTTTTGAATGGAGCTGAAGATTGGTGCTCAGGGTTAGTTGAAGGTGTTGCCATTGCTGATGTTAAAACAGTTGGTGCTGCTGGTTCACCTAAATTTGAGGTTTATAGTACTGATTTTGGGTGTGGAAAACCAAAAAAAGTTGAAATGGCTTCTATAGATAGAACTGGAGCTTTTTGTATTTCTGATTGTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAAGAAAAAAGCAATGGAGGCCTTTGCTTCTCTCTTTACAAAAGGCATTGCATCTTGA 1386 0.3535 MTKIIETLNVSPSSKEQLPSQTSLPLTFFDILWLRLPPVQRIFFYEFPHQPSLFFNTLLPKLKKSLSHTLFHFYPLLGHLIWPIDYHKPIVKHVIGNTLLLTVAESDADFNHLSGNNLCEASQIHDLLPNLNISHDQASVLALQVTLFPNYGFSIGITSHHAVLDGKTSTSFIKSWAYLCNKLESGESESKSELESPLLLPAEFVPFFDRKLINDPNGIEEKYVSVWLKQGGTNNISLKVWDLEVPEESTRGLFQLTRLDIEKLKEFLVSKQKGRNENKKLHLSTFVVSIAYAWVCRVKAEEIEKKNVMLAVNIDCRNRLDGSVPATYFGNCIGARITIVETSKLLGEDGLIVAVEVMSEALETLKDGVLNGAEDWCSGLVEGVAIADVKTVGAAGSPKFEVYSTDFGCGKPKKVEMASIDRTGAFCISDCRNGDGVEIGFVSKKKAMEAFASLFTKGIAS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00287 461 PANTHER - 2 460 - -
Trre14g00287 461 Pfam Transferase family 4 453 - -
Trre14g00287 461 Gene3D - 245 460 IPR023213 -
Trre14g00287 461 Gene3D - 1 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00287 Trre-Chr14 2271001 2272386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00287 42 451 Monolignol Biosynthesis Gene Families AT5G48930 23.810 1.50e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00287 - - mtr:11418791 733.406