Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00286 ATGGCTTCTAACAACATAAAAATCCACGAACACTTCAAGGTTGTTCCTCCATCATCAATTCAAACAACATCAATTCCTCTCTCTTTCTTTGACACATTTTGGCTAAGGTTTCATCCAGTAGAACGAATCTTTTTCTACACCCTCCCAAATTCACAATCACACCCTTCTTTCTTTTTTGAGAAACTTATTCCAAAACTCAAATCATCACTCTCTTTAACCCTCAAATACTTTCTCCCTTTAGCCGGTAACATTGTTTGGCATGCCGAATCACCAAACCCGATAATCCAATACACCCCAAATGACGGTGTTTCTTTGCTCATTGCAGAGTCTAACTCAAATTTCAATCATGTCATTGAAAACTCACCACATGAAGCTTCTTTGTCTCGTTCTTTTATACCTCACTTGGAATCAACAGATTCTTTTGCTTCTATTATCTCACTACAAATCACCATTTTCCCAAATAGTGGTTTCAGCATAGGAATCAGTACAAACCATGCTGTTCTTGATGGAAAATCTATAACCATGTTCATCAAAGCTTGGGCTTATCTATGCAACAAAACAAATGAAACCAATGAATCACCAACATTGTTGCCAGAGTTAGAACCTTTATTCAACAGGGAAATCATTAAAGATCCAAATGGACTTAGTGTTTTATTAAAAGATAAATTGATTGAGATTATGTACAAGATGTTCCCAAATGAAAAACGAAACAACCGAAGCCTAAAGATGTTTCCTTTTGAACCAAAACTTAAAGATTATGTTCGTGCTACGTTCGAGCTTACATGTGAGGACTTGGATAAAATAAAACAAAGGGTGTTATCCACGTGGGAATTATTCGATTTAGGAGAATCAAGGCCAAAAACTCTATCATCGTTTGTTCTCGCTTGTGCTTATTCGAGTTTAGAACCACCAATCCCAAATAATTATTTTGGAAATTGTGTATTAGTATTAGGGTATTTAGTTGATACACAATCATTGGATTTCATAAAAGAAGATGGAGTAATTTTAGTTACCAAGAGTATTCATGATAAAATAAAGATGTTAAATGATAAGGGTCTTATTGAGGGACTAAAGGATAGTGCTTCTAAATATAGTTCTTTATCAAGTGAAAAAGTTGAATATATAGGATTAGTGGGGTCTAATAGATTTGGTGTTTATGAGACTGATTTTGGTTGGGGAAAGCCAGCAAAGGTGGAGATAGTATCAATTGATAGAGGCTTAACCATTGGTTTGGCTGAGAGCAAAGATGGGAGTGGTGGTGTTGAAGTTGGGCTTATTCTAAATAAGAATGTGATGAATCTATTTAGCACTCTATTTCGTGAAGGATTATGCATTAATTCTGATGGAATCATTAATCAACTTCCTTACATATATTGA 1377 0.35 MASNNIKIHEHFKVVPPSSIQTTSIPLSFFDTFWLRFHPVERIFFYTLPNSQSHPSFFFEKLIPKLKSSLSLTLKYFLPLAGNIVWHAESPNPIIQYTPNDGVSLLIAESNSNFNHVIENSPHEASLSRSFIPHLESTDSFASIISLQITIFPNSGFSIGISTNHAVLDGKSITMFIKAWAYLCNKTNETNESPTLLPELEPLFNREIIKDPNGLSVLLKDKLIEIMYKMFPNEKRNNRSLKMFPFEPKLKDYVRATFELTCEDLDKIKQRVLSTWELFDLGESRPKTLSSFVLACAYSSLEPPIPNNYFGNCVLVLGYLVDTQSLDFIKEDGVILVTKSIHDKIKMLNDKGLIEGLKDSASKYSSLSSEKVEYIGLVGSNRFGVYETDFGWGKPAKVEIVSIDRGLTIGLAESKDGSGGVEVGLILNKNVMNLFSTLFREGLCINSDGIINQLPYIY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00286 458 Gene3D - 249 445 IPR023213 -
Trre14g00286 458 Gene3D - 2 235 IPR023213 -
Trre14g00286 458 PANTHER - 6 443 - -
Trre14g00286 458 Pfam Transferase family 299 437 - -
Trre14g00286 458 Pfam Transferase family 6 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00286 Trre-Chr14 2268127 2270258 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00286 6 441 Monolignol Biosynthesis Gene Families AT5G48930 22.912 6.22e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00286 - - tpra:123889238 619.387