Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00279 ATGGCATCATCAATCAATAACCGCAAACCAAGTGAAATTTTCAAAGCACAAGCACAATTATACAAACACATGTATGCCCACATAGATTCCATGTCTCTCAAATGGTCAATTGAAATGAACATACCAAATATAATCCATGACCATGGCAAACCAATTTCTCTTTCAAACTTAGTGTCAATTCTTCAAATTCCATCCTCGAAAATCGATAACGTGCAACGTCTCATGCGGTACCTCGCGCACAATGGAATCTTCGAGATAATAAAAAATCAAGAATTGGAAAATGAAGAAGAAGCTTATGCTCTCACAGTTGTTTCAGAGCTTCTTGTTAAAGGAAGTGAACTTTGTTTAGCTCCAATGGTTGAGTGTGCTCTTAATTCAACATTTTCATCTTCATTTCATAAGTTCAAGAAATGGATCTATGAAGAAGATCTTACACTCTTTGCAGTCAATTTAGGATCTGATTTTTGGGAGTTTCTTAATGAAAATCCTAAATATAATACAATGTTTAATGATGCAATGGCTAGTGATTCTAAAATGATAAATTTGGCATTGAAAGATTGTGATTTTGTGTTTGAAGGGTTGGAATCAATTGTTGATGTTGGTGGTGGAAATGGAACAACAGCTAAGATTATTTGTGAGAAATTTCCTAAGTTGAAATGTGTTGTGTTTGATAGGCCAAAGGTTGTTGAGAATTTATCTGAAAGTGATAATTTGACTTATGTTGGTGGGGATATGTTCACATCTATTCCTAAAGCTGATGCTGTTCTGCTTAAGTGGATTTTACATGATTGGACAGATAAGGATTGTATAAGGATACTGAAAAAATGTAAAGAAGCTGTAACAAGTGATGATGGAAAAAGAGGAAAAGTGATTGTGATAGATATGGTGATAAATGAAAAGAAAGAAGATAACCAACTTACTGAAATAAAGCTCCTTATGAATGTATCAATTTCATGTCTTAATGGAAAAGAAAGAACTGAGAAAGAATGGAAGAAACTCTTCATAGAAGCAGGTTTCCAAGACTACAAAATTTCTCCTTGTACTGAATTATTGTCTCTTATTGAGATCTATCCTTAA 1077 0.3352 MASSINNRKPSEIFKAQAQLYKHMYAHIDSMSLKWSIEMNIPNIIHDHGKPISLSNLVSILQIPSSKIDNVQRLMRYLAHNGIFEIIKNQELENEEEAYALTVVSELLVKGSELCLAPMVECALNSTFSSSFHKFKKWIYEEDLTLFAVNLGSDFWEFLNENPKYNTMFNDAMASDSKMINLALKDCDFVFEGLESIVDVGGGNGTTAKIICEKFPKLKCVVFDRPKVVENLSESDNLTYVGGDMFTSIPKADAVLLKWILHDWTDKDCIRILKKCKEAVTSDDGKRGKVIVIDMVINEKKEDNQLTEIKLLMNVSISCLNGKERTEKEWKKLFIEAGFQDYKISPCTELLSLIEIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00279 358 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Trre14g00279 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Trre14g00279 358 Pfam O-methyltransferase domain 133 340 IPR001077 GO:0008171
Trre14g00279 358 PANTHER O-METHYLTRANSFERASE 14 343 IPR016461 GO:0008168
Trre14g00279 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Trre14g00279 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Trre14g00279 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Trre14g00279 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 355 IPR029063 -
Trre14g00279 358 Gene3D - 1 108 IPR036388 -
Trre14g00279 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Trre14g00279 358 FunFam O-methyltransferase ZRP4 110 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00279 Trre-Chr14 2223568 2225451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00279 10 344 Monolignol Biosynthesis Gene Families AT5G54160 31.034 3.65e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00279 K22588 K13262 ag:AAC49926 581.637