Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00278 ATGGCTTCTCCAAACAACCACATCAAAATCCATGAACAATGCAAAGTTTCTCCTCATTCTTCAACACAATTATCTCTTCCTCTCACTTTCTTTGACTTGATTTGGCTAAGGTTCCATCCAGTAGAACGCATCTTTTTCTACACCCTCCCAAATTCCCAATCACACCCTTCTTCCTTCTTCCATAATCTTGTTCCAAAACTCAAAACCTCACTCTCTTTAACCCTCCAACACTTCCTCCCTTTAGCCGGTAATATCGTTTGGCCTTCTGATTCTCCCAAACCATTCATCCAATTCAATGCAAACAATAACGGAGTTTCATTGCTCTTAGCTCAGTGTGATGATGATATAGACTTCAATAAAATCTTGGAGCACAATTCACCTCACGAAGCTTCTTTGTCTCGTTCTTTTGTACCACACTTAGAATCAACAGATTCTTTTGCTTCTATTATCTCAATTCAAATAACTCTTTTTCCCAAAAGTGGTTTTTCCATTGGAATAAGCACACACCATGCCGTTCTTGATGGAAAATCTTCAACCATGTTCGTTAAAGCTTGGGCTTCTACATGTAAATCTCTTGAGGAAACAAAATCACCAAATTTGGAACCTTTTTTAGAACCCTTTTTGGAAAGGGAAGTAATCAAAGATCCAAAGGATCTTGAGAATGTGTTCATAAATAGTTGGAATAGAATCTCATCACATTTTGATAAAAGCAATGTGAAAAGCGTAAAGATTATGTCAAACATGTTTCAACCAATCATTAAGGATTCGGTTCGAGCCACATTCGAGCTCACACGCGCGGATTTGGAGAAATTAAACAAAAGGATATTGTCCGAATGGAACAATGTTGTAGAAGGAGCACAAGAACAAGAACATCCTAAGAAATTATCAAGTTTTGTTCTTACGTGCTCTTATGTGTCTGTTTGCATAGCAAAAGCGATACAACAATCCGAAAGCGATAAAAAGCAAAAATTTTCATTTGGTTTTCCTGTAGATTGTAGAGATAGATTAGATCATCCAATTCCCGAAAACTATTTCGGAAATTGTGTATCTAACCATATAGTTGATACCGAGCCAGAAGATTTTATAAAAGAAGATGGTGTGGTGATTGTTGCTAAGAAAATTTATGGTAAAATAAAAAATATGGACAAGGGTGTTCTTGATGGATTAGATACATTGATTTTTAAATTAATGGCTATGATTGGTGAAGGAATTAAAGGAATTGGAGTTGCTGGATCAACAAAGTTTGGAGTATATGAGATTGATTTTGGTTTTGGAAGGCCTGAAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACAATTGGATTAACAGAAAGTAAGGATTTGAAAGGTGGTGTTGAAGTTGGGCTTGTTCTTAATAAGCATGTGATGGATTTGTTTCATACCATTTTTCATGAAGGCATATGCTTTGATTCATGA 1440 0.359 MASPNNHIKIHEQCKVSPHSSTQLSLPLTFFDLIWLRFHPVERIFFYTLPNSQSHPSSFFHNLVPKLKTSLSLTLQHFLPLAGNIVWPSDSPKPFIQFNANNNGVSLLLAQCDDDIDFNKILEHNSPHEASLSRSFVPHLESTDSFASIISIQITLFPKSGFSIGISTHHAVLDGKSSTMFVKAWASTCKSLEETKSPNLEPFLEPFLEREVIKDPKDLENVFINSWNRISSHFDKSNVKSVKIMSNMFQPIIKDSVRATFELTRADLEKLNKRILSEWNNVVEGAQEQEHPKKLSSFVLTCSYVSVCIAKAIQQSESDKKQKFSFGFPVDCRDRLDHPIPENYFGNCVSNHIVDTEPEDFIKEDGVVIVAKKIYGKIKNMDKGVLDGLDTLIFKLMAMIGEGIKGIGVAGSTKFGVYEIDFGFGRPEKVEITSIDRGLTIGLTESKDLKGGVEVGLVLNKHVMDLFHTIFHEGICFDS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00278 479 Gene3D - 7 240 IPR023213 -
Trre14g00278 479 Pfam Transferase family 12 469 - -
Trre14g00278 479 PANTHER - 8 475 - -
Trre14g00278 479 Gene3D - 253 477 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00278 Trre-Chr14 2220425 2221864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00278 8 473 Monolignol Biosynthesis Gene Families AT5G48930 23.909 1.67e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00278 - - gmx:100813762 592.423