Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00277 ATGACTTCCCCAAACAAGCACATCAAAATCCATGAACAATGCAAAGTTTCTCCTCATTCTTCAACCCAATTATCTCTCCCTCTCACTTTCTTAAACTTGATGTGGCTAAGGTTCCATCCGGTAGAACGCATCTTCTTCTACACCCTCCCAAATTCACAATCACACCCTACTTTCTTCTTCCAAAATCTTGTTCCAAAACTCAAATCTTCACTCTCTTTAACCCTCCAACACTTCCTCCCGTTAGCCGGTAACATCATTTGGCCTTCCGATTCTCCAAAACCCTTCATCCAATTCAATCCAAACGATGATGGAGTTTCTTTGCTCTTAGCTCAGTGTGATGATGATGATATAGACTTCAATAAAATCTTGAAGCACAATTCGTCTCATGAAGCTTCTTTGTCTCGTTTTTTTATACCTCATTTAGAATTAACCGATTCTTTTGCTTCTATTATCTCAATTCAAATAACTCTTTTTCCAAACAATGGTTTTTCCGTTGGAATAAGCACACACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATCAAAGCTTGGGCTTCTATATGTAAATCTTTTGAAGAAACACAATCACCAAATTTGGAACCTTTTTTAGAACCCTTTTTGGAAAGAGAAGTAATCAAGGATCCAAATGATTTTGAGAATGTGTTCATAAATAATTGGAACAAAATCTCATTACATTTTGATAATAGCAATGTGAGAAGCATAAAGATTATGTCAAACATGTTTCAACCAAAAACTAAGGATTCCATTCGCGCTACGTTCGAGCTCACACGCGCGGATTTGGAGAAATTAAACAAAAGAGTATTGTCCAAATGGAACAATATTGTAGAAGAAGGAGCACAAGAACAAGAACATCCTAAGAAATTGTCAAGTTTTGTTCTTACATGTGCTTATGTGTCTGTTTCCATAGCAAAAGCGATACAACAATCCGAAAGCGATAAAAAACAAAAATTTTGTTTAGGTTTTCCAGTGGATTACAGGGCTAGATTAGATCCTCCAATTCATGAAAACTATTTTGGAAATTGTGTATGTAATCATGTAGTTGATACTGAGCCAGAGGATTTTACAAAAGAAGATGGATTGGTGATTGTTGCTAAGAAAATTTATGGTAAGACTAAAAAAATGGATAAGGGTATTCCTGAAGGAACTGAGACATTGATGTTTAGATATATGGCTATGATTGAAGAAGGAATTAAACCAATGGGAGTTGCTGGATCAACAAGGTTTGGAGTATATGATATTGATTTTGGTTTTGGAAGGCCTGAAAAAGTGGAGATTACTTCAATTGATAGAGGATTAACAATTGGATTAACAGAAAGTAAGGATTTGAAAGGTGGTGTTGAGGTTGGGCTTGTTCTTGATAAGAATGTGATGGATTTGTTTCATACCATTTTTCATGAAGGTATATGCTTTGATTCATGA 1446 0.3555 MTSPNKHIKIHEQCKVSPHSSTQLSLPLTFLNLMWLRFHPVERIFFYTLPNSQSHPTFFFQNLVPKLKSSLSLTLQHFLPLAGNIIWPSDSPKPFIQFNPNDDGVSLLLAQCDDDDIDFNKILKHNSSHEASLSRFFIPHLELTDSFASIISIQITLFPNNGFSVGISTHHAVLDGKSSTMFIKAWASICKSFEETQSPNLEPFLEPFLEREVIKDPNDFENVFINNWNKISLHFDNSNVRSIKIMSNMFQPKTKDSIRATFELTRADLEKLNKRVLSKWNNIVEEGAQEQEHPKKLSSFVLTCAYVSVSIAKAIQQSESDKKQKFCLGFPVDYRARLDPPIHENYFGNCVCNHVVDTEPEDFTKEDGLVIVAKKIYGKTKKMDKGIPEGTETLMFRYMAMIEEGIKPMGVAGSTRFGVYDIDFGFGRPEKVEITSIDRGLTIGLTESKDLKGGVEVGLVLDKNVMDLFHTIFHEGICFDS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00277 481 SUPERFAMILY CoA-dependent acyltransferases 314 452 - -
Trre14g00277 481 Gene3D - 7 241 IPR023213 -
Trre14g00277 481 PANTHER - 8 477 - -
Trre14g00277 481 Gene3D - 254 479 IPR023213 -
Trre14g00277 481 Pfam Transferase family 9 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00277 Trre-Chr14 2216829 2218274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00277 8 475 Monolignol Biosynthesis Gene Families AT5G48930 23.859 1.15e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00277 - - gmx:100813762 566.229