Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00257 ATGGCTTTGTCTCATTCTTTGGTTCCTTTGACATGTTTTATGTTGCTTCTCGTACAGGCCATGGCTCAAATTGATCCCAATTGGTACGATGCTCGTGCAACTTTCTATGGTGATGCAACAGGGGGTGAAACCATGCAGGGGGCTTGTGGTTATGGTGATCTTTTCCAACAAGGATATGGGCTTGCAACCACGGCACTAAGCACATCTCTATTTAATAAAGGATCTACTTGTTAG 234 0.4402 MALSHSLVPLTCFMLLLVQAMAQIDPNWYDARATFYGDATGGETMQGACGYGDLFQQGYGLATTALSTSLFNKGSTC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00257 77 PANTHER EXPANSIN-A15 13 77 IPR002963 GO:0009664
Trre14g00257 77 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 77 IPR007112 -
Trre14g00257 77 PRINTS Expansin/Lol pI family signature 67 77 IPR007118 GO:0005576
Trre14g00257 77 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Trre14g00257 77 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Trre14g00257 77 SUPERFAMILY Barwin-like endoglucanases 14 77 IPR036908 -
Trre14g00257 77 Gene3D - 16 77 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00257 Trre-Chr14 2037572 2038093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00257 24 77 Expansin Gene Family AT5G39290 79.630 1.54e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00257 - - qsu:112027350 103.99