Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00241 ATGCCCACCTTCTCCTCTCTCCCTAGGTGGATTGGTGGAAAGAATCCTAAGAGCACAATCAACAACGTCGGTGACAGCGGCGACGACACTGGAGTTGTGGTCGTAGACGACAATCCAGTGACAAGTGTGGTGGAGTGTTACGCCTGCACACAAGTTGGTGTGCCGGTGTTCCACTCCACCAGCTGCGATAGCTGTCACCAACCAGAATGGGAAGCATCAGCAGGTTCTTACTTAGTTCCAATACAAAACCGTCCCGGAAAATTCGCAAGAGCGGTTACAGGGGCAAATTGGGGACCTTTAGGAAAAGTTTTAGATCCAAGAAGCAAGCGCGTGCAAATATGGAACCGCGCGTTGTTATTGGCGCGTGGTGTTGCGTTGGCGATTGATCCATTGTTTTTCTATGCGCTGTCGATAGGGAGAGAAGGTTCGCCGTGTTTGTATATGGACGGTGGTTTAGCGGCGGTTGTTACGGTGGCGCGTACGGTTGTTGATGCGGTGCATTTGTTTCATGTTTTGTTGCAGTTTAGATTAGCGTATGTGTCGAGAGAATCGCTTGTTGTTGGATGTGGGAAACTCGTGTGGGACGCACGTGCCATTGCTTCTCATTATATGAGATCTTTCAAAGGATTTTGGTTTGATGTTTTTGTTATTCTTCCTGTGCCTCAGGCTGTGTTTTGGCTAGTAGTACCAAAATTGATAAGAGAAGAGAGGATTAAAATAATTATGACAACAATGCTATTGATTTTTTTGTTCCAATTTCTACCTAAGGTTTACCATAGCATATCTATGATGAGAAGAATGCAAAAAGTCACAGGCTATATCTTTGGCACCATTTGGTGGGGATTTGGACTCAATCTCATAGCTTATTTCATTGCCTCTCATGTTGCCGGAGGGTGTTGGTATGTCCTTGCGATTCAACGCGTTGCATCGTGCCTTCAACAGCAATGTGAAAGAACTGCTGGATGCAGTCTCTCTCTGTCATGCCAAGAAGAAGTATGTTATCAGTCAATTTTGCCACCAGGAACCATTGGAAATCCATGTGGTGGAAACTCAACAATGAGTAAGCCAGTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCTGTCATATCCAGCAATTCCTTAGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTAATTTTCAGCATATGCATTGTACTCGCTGGACTACTACTTTTCACTCTGTTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCCCGGTTAAGACAAAGAGTTCGGCATTTTGAACGTCAGAGATGGGCAGCCATGGGCGGAGAAGATGAGATGGAACTGATCAAAGACTTACCTGAGGGTCTGAGGAGAGACATCAAGCGCTATCTTTGCTTAGACCTCATTAAAAAGGTACCATTATTCCATAACTTGGATGATCTTATTCTTGACAACATTTGTGACAGAGTGAAGCCCCTAGTCTTCTCTAGAGATGAAAAGATAATTAGAGAAGGTGATCCTGTACCAAGGATGGTGTTTATTGTCCGGGGACGCATAAGGCGAAACCAAAGTCTCAGCAAAGGCGTGGTAGCAACAAGTGTCCTTGAACCAGGAGGCTTTTTAGGCGATGAACTTCTTTCCTGGTGCCTTAGACGTCCTTTTATAGACCGGCTTCCGGCCTCCTCAGCTACATTTGTGTGCCTCGAATCAACAGAAGCATTCGGTCTTGATGCTCAAAACTTGAGGTACATAACTGATCACTTCCGGTACAAATTTGCGAACGAGAGGCTTAAGAGAACAGCGAGATACTACTCGTCGAATTGGAGAACATGGGCTGCTGTCAACATTCAACTTGCTTATAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGAGACAATGGCGGCACTGAGCGCAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATTAGGCCACATGATCATCTTGAATAA 2115 0.4525 MPTFSSLPRWIGGKNPKSTINNVGDSGDDTGVVVVDDNPVTSVVECYACTQVGVPVFHSTSCDSCHQPEWEASAGSYLVPIQNRPGKFARAVTGANWGPLGKVLDPRSKRVQIWNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLAAVVTVARTVVDAVHLFHVLLQFRLAYVSRESLVVGCGKLVWDARAIASHYMRSFKGFWFDVFVILPVPQAVFWLVVPKLIREERIKIIMTTMLLIFLFQFLPKVYHSISMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCERTAGCSLSLSCQEEVCYQSILPPGTIGNPCGGNSTMSKPVCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSRDEKIIREGDPVPRMVFIVRGRIRRNQSLSKGVVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAYRRYRQRTRGPVTPVRDNGGTERRLLQYAAMFMSIRPHDHLE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00241 704 Gene3D Jelly Rolls 515 633 IPR014710 -
Trre14g00241 704 SMART cnmp_10 517 643 IPR000595 -
Trre14g00241 704 ProSiteProfiles cAMP/cGMP binding motif profile. 517 627 IPR000595 -
Trre14g00241 704 SUPERFAMILY Voltage-gated potassium channels 105 438 - -
Trre14g00241 704 Pfam Ion transport protein 112 435 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Trre14g00241 704 CDD CAP_ED 517 627 IPR000595 -
Trre14g00241 704 SUPERFAMILY cAMP-binding domain-like 444 631 IPR018490 -
Trre14g00241 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 101 670 - -
Trre14g00241 704 Gene3D - 143 440 - -
Trre14g00241 704 Gene3D Helix hairpin bin 443 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00241 Trre-Chr14 1924787 1930171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00241 37 704 Ion Channels AT5G15410 79.148 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00241 K05391 - gmx:100798823 1207.97