Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00234 ATGGTACTAGGTGCCAATTTGGTGTTTATTGCTGTTCTTAATGCTGCAATTGAACTCAACTTGTTTGAAATCATAGCTAAAGAAAGTTCACCAAGTAATGGTGGATTCATTTCAACCTTTGAAATTGCTTCAAAGTTACCAACTCAACACTCTGACTTGCCTAATCGGCTCGACCGGATGTTGCGCTTGCTTGCTAGCCACTCTCTTTTGTCCGTTTCGAATCGGACCAATGATGATGATGGTAGCTTGGTGAGAGTTTATGGTCTCACACCATCTGGTAAATACTTTGTTAATGGTGAAAATGATTGTGGCTATTTGGGTTCAATGTCAACATATTTGTCTCACCGTGCTTCCTTAGGGGTGTGGTTGAATTTCAAGGAAGCAGTCATGAATCCACATATAGACCTATTCACGAAAGTTCATGGAACATCTTTCTTTGAAGGATTTGAGGGAATATCAACACTGGTTGATGTAGGAGTGATTGAAAATACATCACCCTTTCCAGGGATTGAAAATGTTGGAGGAAGTATGTTTGAAAGTGTTCCACAAGGAGATGCCATAATGCTTAAGTTTGTATGCCATAATTGGTCGGATGAAAAATGCTTAGAAATTTTAAGCAATTGTCACAAAGCTTTGCCTCTAAATGGTAAAGTCATTCTTGTGGAGTTCTTATTTCCAGAAGATGTAGGATCAACAAATAATGCATCTAAGATGGTTTCAACAATTGATAACATCATGTTTATTACAGCTGGTGGTAAGGAAAGAGCACTTCAAGAATATGAGAGTTTAGGTAAAAAATCTGGATTTTCTAACCTTCAAGTTATTTGTCGTGCTTTTTCCATTCTTGGAATGATGGAACTATACAAGTAA 870 0.3759 MVLGANLVFIAVLNAAIELNLFEIIAKESSPSNGGFISTFEIASKLPTQHSDLPNRLDRMLRLLASHSLLSVSNRTNDDDGSLVRVYGLTPSGKYFVNGENDCGYLGSMSTYLSHRASLGVWLNFKEAVMNPHIDLFTKVHGTSFFEGFEGISTLVDVGVIENTSPFPGIENVGGSMFESVPQGDAIMLKFVCHNWSDEKCLEILSNCHKALPLNGKVILVEFLFPEDVGSTNNASKMVSTIDNIMFITAGGKERALQEYESLGKKSGFSNLQVICRAFSILGMMELYK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00234 289 FunFam Caffeic acid 3-O-methyltransferase 1 96 - -
Trre14g00234 289 PANTHER O-METHYLTRANSFERASE 5 269 IPR016461 GO:0008168
Trre14g00234 289 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 160 289 IPR016461 GO:0008168
Trre14g00234 289 Pfam Dimerisation domain 12 65 IPR012967 GO:0046983
Trre14g00234 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 285 IPR029063 -
Trre14g00234 289 SUPERFAMILY "Winged helix" DNA-binding domain 5 100 IPR036390 -
Trre14g00234 289 Gene3D Vaccinia Virus protein VP39 160 278 IPR029063 -
Trre14g00234 289 Gene3D - 6 135 IPR036388 -
Trre14g00234 289 Pfam O-methyltransferase domain 168 270 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00234 Trre-Chr14 1889568 1891657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00234 1 289 Monolignol Biosynthesis Gene Families AT5G54160 37.644 1.06e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00234 - - gmx:100798295 355.525