Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00233 ATGACCGATACATGCGCAATTCATTTGAAAAAAATCCTTGAAATATACAAAGGATTTGAGGGAATAACAACACTGGTTGATGTAGGAGGTGGAAATGGACAAAGTCTTAAAACAATTATATCCAAATATCCATCAATAAAGGCAATAAACTTTGATCTCCCACAAGTCATTGATAATACTCCACCCTTTCCAGGGATTGAAAATGTAGGAGGAAGTATGTTTGAAAGTGTTCCGCAAGGAGATGCAATAATGCTTAAGTTTATATGCCATAATTGGTCAGATGAGAAATGCTTAGAAATTTTAAGCAATTGTCACAAAGCTTTGCCTCCAAATGGTAAAGTCATTCTTGTGGAGTTCTTATTTCCAGAAGATCTAGGGTCAACAAATAATGCATCTAAGATGGTTTCAGCAATTGATAACATCATGTTTATTACAGCTGGTGGTAAGGAAAGAAGTCCAAAAGAATATGAGATTTTAGGTCAAAAATTTGGATTTTCTAAACTTCAAGTCATTTGTCGTGCTTTCTCCATTCTTGGAGTGATGGAACTATACAAGTAA 558 0.3459 MTDTCAIHLKKILEIYKGFEGITTLVDVGGGNGQSLKTIISKYPSIKAINFDLPQVIDNTPPFPGIENVGGSMFESVPQGDAIMLKFICHNWSDEKCLEILSNCHKALPPNGKVILVEFLFPEDLGSTNNASKMVSAIDNIMFITAGGKERSPKEYEILGQKFGFSKLQVICRAFSILGVMELYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00233 185 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 185 IPR016461 GO:0008168
Trre14g00233 185 Gene3D Vaccinia Virus protein VP39 7 174 IPR029063 -
Trre14g00233 185 Pfam O-methyltransferase domain 1 166 IPR001077 GO:0008171
Trre14g00233 185 PANTHER O-METHYLTRANSFERASE 1 165 IPR016461 GO:0008168
Trre14g00233 185 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 182 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00233 Trre-Chr14 1879518 1880539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00233 1 185 Monolignol Biosynthesis Gene Families AT5G54160 54.301 2.23e-66 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00233 - - gmx:100798295 271.552