Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00231 ATGAGTTCCTATTTCAATGAGAAACAAAACCATGTTGTGGAAACTCAAACCCCACAAATAGAAGACAGTGATACACTTTCCGCCATGGTACTAGGTGCCAATTTGGTTTTTCCTGCAGTTCTTAATGCTGCAATTGAACTCAACTTGTTTGAAATCATTGCTAAAGAAAGTTCACTAGATAATGGTGGATTCTTATCAGCTTTTGAAATTGCTTCAAAGTTACCAACTCAACACTCTGACTTACCGAATAGGCTTGATCGTATGTTGCGCTTGCTTGTTAGCTACTCTCTTCTGTCTGTTTCCACTCGGACCAATGACGATGATGGTAGTATCGTGAGAGTTTATGCGATCACCCCGTCGGGAAAATATTTTTCCTATGACGAAAATAATGACCATGGTTATCTTGGCTACTTCACATCGTTTATGTGTCACCCTGCTTTGATAGGGTTGTGGTTGAATTTCAAGGAAGCAGTGGTTGATCCAGAGGTTGACTTGTTCAAGAAAGTTAATGGAATGTCCAAGTATGAGTACATGGGGAAAGATCCACAAGTGAACCAAATATTCAACAAATCAATGACTAATGGCACCAAAATTCACATGAAAAAAATCCTTGAAATATACAAAGGATATGAGGGTGTATCAACTTTGGTTGATGTAGGTGGTGGAAATGGACAAACTCTCAAAATGATCATTGAAAATTATCCATCAATAAAGGGAATAAATTTTGATCTCCCTCAAGTGATTGAAAATGCATCACCCATTCCAGGGATTGAGCATATTGGAGGAAGTATGTTTGAAAGTATTCCACAAGGAGATGCCATAATGCTTAAGGCTGTATGCCATAATTGGTCAGATGAAAAATGCATAGAAATTTTTAGCAATTGTCACAAAGCTTTGCCTCAAAATGGAAAGGTCATACTTGTGGAGCTTGCATTGTCTGAATATCCAGAAGCAACAAATGCATCTCGAATGATTTCAATTATTGACAATATCATGTTCATCAATGCTGGTGGAAAAGAAAGAACTGCAAAAGAATATGAAAAATTGGCTCAACATTCTGGATTTTCAAGACTTGAAGTTGTTTGTTGTGCTTTCTCTATTATAGGAGTGATGGAACTTCACAAATAA 1128 0.3723 MSSYFNEKQNHVVETQTPQIEDSDTLSAMVLGANLVFPAVLNAAIELNLFEIIAKESSLDNGGFLSAFEIASKLPTQHSDLPNRLDRMLRLLVSYSLLSVSTRTNDDDGSIVRVYAITPSGKYFSYDENNDHGYLGYFTSFMCHPALIGLWLNFKEAVVDPEVDLFKKVNGMSKYEYMGKDPQVNQIFNKSMTNGTKIHMKKILEIYKGYEGVSTLVDVGGGNGQTLKMIIENYPSIKGINFDLPQVIENASPIPGIEHIGGSMFESIPQGDAIMLKAVCHNWSDEKCIEIFSNCHKALPQNGKVILVELALSEYPEATNASRMISIIDNIMFINAGGKERTAKEYEKLAQHSGFSRLEVVCCAFSIIGVMELHK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00231 375 PANTHER O-METHYLTRANSFERASE 28 355 IPR016461 GO:0008168
Trre14g00231 375 FunFam Caffeic acid O-methyltransferase 129 375 - -
Trre14g00231 375 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Trre14g00231 375 PIRSF O-mtase 5 375 IPR016461 GO:0008168
Trre14g00231 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 375 IPR016461 GO:0008168
Trre14g00231 375 SUPERFAMILY "Winged helix" DNA-binding domain 25 128 IPR036390 -
Trre14g00231 375 Gene3D - 5 124 IPR036388 -
Trre14g00231 375 Gene3D Vaccinia Virus protein VP39 128 375 IPR029063 -
Trre14g00231 375 FunFam Caffeic acid 3-O-methyltransferase 6 124 - -
Trre14g00231 375 Pfam Dimerisation domain 40 93 IPR012967 GO:0046983
Trre14g00231 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 371 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00231 Trre-Chr14 1864151 1867132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00231 12 367 Monolignol Biosynthesis Gene Families AT5G54160 48.077 2.97e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00231 - - gmx:100798295 518.464