Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00204 ATGGGAAGATCACCATGTTGTGAAAAAGTTGGTTTGAAAAAAGGACCATGGACACCTGAGGAAGATCAAAAGCTCTTATCTTACATTGAAGAACATGGTCATGGAAGTTGGCGTGCTCTCCCTACAAAAGCTGGACTTGAGAGATGTGGAAAGAGTTGTAGATTGAGATGGACTAATTATTTAAGGCCTGATATTAAGAGAGGAAAGTTTACTTCACAAGAAGAACAAACCATTATTCAACTTCATGCACTATTAGGCAACAGGTGGTCAGCAATAGCCACACATTTACCTAAGAGAACAGATAATGAAATCAAGAATTATTGGAACACACATCTTAAAAAAAGGTTAACAAAAATGGGAATTGATCCTATTACACACAAACCAAAAAATGAAACACTTTTCTCTGATAATCATTCCAAGAATGCTGCAAATCTTAGTCACATGGCTCAATGGGAAAGTGCAAGACTTGAAGCTGAAGCAAGATTGGTTAGAGAATCAAAGCTACGTTCACAATATTCATTGCAAATTGGAAGTAATAATTCTGTTTTTCCATCACAATCTTCATCATCTGCATCATCATCTTCAAATCAAGTACTTAATATTAAAGAAGAAGGTGAAAAAGAGTGGAAAGGTTATGAAGATTCAACACATTTGTTAGAATTCAAAGAAGTGATGGAGAATTCATCAATAGCTTTTACTTCTACAATGACTAGTGTTGCTGAGGACGGTTTCACTAATCTCTTGCTCGATAATTCTAACTCCGGTGATCCGAGTTTGTCACCAGAGAGCGGTGGAGAGTGTAATACTTGCGATGGAAGTGGTAGCGGCGGTGGTGGAAGTGGAAGTGATTTCTATGAAGACAACAAGAACTACTGGAACAATATTCTTAATTTAGTTAACTCTTCACCTTCTAATTCGCCGATGTTCTAA 930 0.3699 MGRSPCCEKVGLKKGPWTPEEDQKLLSYIEEHGHGSWRALPTKAGLERCGKSCRLRWTNYLRPDIKRGKFTSQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPITHKPKNETLFSDNHSKNAANLSHMAQWESARLEAEARLVRESKLRSQYSLQIGSNNSVFPSQSSSSASSSSNQVLNIKEEGEKEWKGYEDSTHLLEFKEVMENSSIAFTSTMTSVAEDGFTNLLLDNSNSGDPSLSPESGGECNTCDGSGSGGGGSGSDFYEDNKNYWNNILNLVNSSPSNSPMF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00204 309 Gene3D - 13 66 - -
Trre14g00204 309 MobiDBLite consensus disorder prediction 250 276 - -
Trre14g00204 309 CDD SANT 69 112 IPR001005 -
Trre14g00204 309 CDD SANT 16 61 IPR001005 -
Trre14g00204 309 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Trre14g00204 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Trre14g00204 309 MobiDBLite consensus disorder prediction 179 199 - -
Trre14g00204 309 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Trre14g00204 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Trre14g00204 309 SMART sant 66 114 IPR001005 -
Trre14g00204 309 SMART sant 13 63 IPR001005 -
Trre14g00204 309 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 230 - -
Trre14g00204 309 Gene3D - 68 143 - -
Trre14g00204 309 FunFam MYB-related transcription factor 13 66 - -
Trre14g00204 309 MobiDBLite consensus disorder prediction 250 282 - -
Trre14g00204 309 FunFam MYB transcription factor 68 129 - -
Trre14g00204 309 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Trre14g00204 309 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Trre14g00204 309 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00204 Trre-Chr14 1665288 1667493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00204 1 309 MYB Transcription Factor Family AT3G01140 55.462 6.29e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Trre14g00204 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00204 K09422 - fve:101311397 377.481