Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00202 ATGAGATCATATGAAAATGTTTTCAAACACATAATGGATGATGAAAAGTTCAAACTTCCGGTTGGTTTTCGATTCCATCCGACCGATGAAGAGCTCATAAGTCAATACCTTGTCAAGAAGGTTATTGACGATAGCTTCTGTGCTATAGCTATCGCAGAGATTGATATGAATAAGTGTGAACCATGGGATTTGGCTGAGTTAGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTGTGAGGGACAAAAAATACCCAACTGGACAAAGGACAAACAGGGCTACTAATGCTGGTTACTGGAAGGCCACTGGCAAAGACAAAGAGATTATCAAGGGAAATGACTTAATTGGGATGAAGAAAACACTGGTTTTCTACAAAGGAAGAGCTCCAAGAGGTGAAAAAACCAATTGGGTCATGCATGAATACAGACTGGAGGGTAAAAACACAATTTCTGACCAGAATCTCTCCAAACAAGGATCGGGTGAATGGGTTATATCTAGAGTCTATGAGAAGGGAAATTTTGGAAGGAAAATGCATGGTAATTCAAAACTTGTAAGGTTTAACTCTTCTAGAGAAGGACCATCAAATGCTAATGAATCTCTATTGCCTCCATTGATGGATTCTCCTCCATACAATAATGAAACCAAAACTAATTTTGGTGATTTCTCTCACCATGTCCTCAATTCCTTCTCCATGAAAAATGATGAAACTATGAACATTTCATCCTCTTCCAAACAATTTGGTGCTGAATTAGCAACACAAAACTGTTTCTTGTCTCAACAAGAATCCATGTTGAAGATGCAAATGGAGAATAATGAGAATATTGCAACAAGTTCAAAGCAATTTGTAAAACAAGACTTTTCTTTTGATGGTGATATTTCATCTGTGGTTTATGGAAATAACATGTTTCAAAGGTGGTATGGGAATCAAGAATTTGCTCCAGCTTCTTCTACTGATCAGCCTGTGGTCACTGATTGCTTGTGGAATTACTGA 993 0.3746 MRSYENVFKHIMDDEKFKLPVGFRFHPTDEELISQYLVKKVIDDSFCAIAIAEIDMNKCEPWDLAELAKMGETEWYFFCVRDKKYPTGQRTNRATNAGYWKATGKDKEIIKGNDLIGMKKTLVFYKGRAPRGEKTNWVMHEYRLEGKNTISDQNLSKQGSGEWVISRVYEKGNFGRKMHGNSKLVRFNSSREGPSNANESLLPPLMDSPPYNNETKTNFGDFSHHVLNSFSMKNDETMNISSSSKQFGAELATQNCFLSQQESMLKMQMENNENIATSSKQFVKQDFSFDGDISSVVYGNNMFQRWYGNQEFAPASSTDQPVVTDCLWNY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00202 330 Gene3D NAC domain 28 175 IPR036093 GO:0003677|GO:0006355
Trre14g00202 330 SUPERFAMILY NAC domain 16 171 IPR036093 GO:0003677|GO:0006355
Trre14g00202 330 MobiDBLite consensus disorder prediction 187 207 - -
Trre14g00202 330 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 267 - -
Trre14g00202 330 FunFam NAC domain-containing protein 100-like 28 175 - -
Trre14g00202 330 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Trre14g00202 330 ProSiteProfiles NAC domain profile. 19 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00202 Trre-Chr14 1649398 1651428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00202 19 330 NAC Transcription Factor Family AT5G07680 48.225 1.26e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre14g00202 NAM 4.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00202 - - cam:101488836 420.239