Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00177 ATGTGTATGGTCTTTGTTCTTATTATTTGGGGTTTGATTGTTGGGACTGAATCTTCTACATTGACATCTCAACGTGAAATGGAAGAAAATGCTATTTTGAAAAGTGGATGGTGGAACACTTCTGATGCAAACTACAACATCTCCAATCGCTGTAATTGGGGTCTGATATTTATTTGCAACAAGGCTGGAAGCATAACAAATATCAGCGTAACAGAAATCAGCAACAAAACATTATATGGAAATAGGATTCACTTTGCAACATTCAACTTGACTGTTTTCCACAATTTAGAAAGCCTTGTTATCAGTTTTGCTGGACTAGAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCTAACCTTATTTATCTTGATCTATCTTTCAATTCTCTTGTAGGTAAGATACCTCTTTCACTAGGAAATCTCACAACACTCACTTATCTTGATCTGTCTTTCAATTCTCTTGTAGGTGAGATACCTCCTTCTCTAGGCAACCTTAGAAAATTAACTATGTTACAAATATCTTACAACAAGCTTCAAGGTTCCATTCCTCATGAGTTGGGATTCATTAAAACACTAGTTTCATTAGGTCTATCTCATAACTTCTTTAATGGTAGTTTTCCCATTTCCATCATAGGAAATCTCACACAATTAGAGGACCTGGACATCTCCCACAACACCATTCAAGGTTCCATTCCTTTTGAGTTGGGGTTCTTAAATAATCTGTTAAGATTAGATCTATCATACAATAGATTCGATAGAAACTTGCCTATTTCCATTACAAATCTCACACAATTAGAAGACCTTGACCTCTCCCACAATTTACTCCTTGGTACCATTCCTTCCAATTTCTTCCTATCGCCAAATTATGAAATTTCCATTGACCTCAGTAACAACCTCATCAGTGGTGAAATCCCTTCTCAGATTGGACATTTTCAAAATCTTAATTTAAGCAATAATAATCTCACTGGAATAGTTCCTGCATCTCTCTGTAATGGATATAATATAGACATTTCTAACAATTGTTTGAAGGGTCCCTTTCCGAATTGTTTTGGTTCTTTAACAACAATAGTAAATACGAACAATAATGTATGTATCGACACTTCATATAACCAATTCCAACATTGGCCACCTCACAAGAAAAATAACAAAGTAATACATGATGTTGTCATTGTCCTTCCTATCATTATTATTCTAATATTAGCCTTCTCACTTGTCTTGTGCTTGAAACTTCGTCATAATTATATGACGAACAAGCATGCAAACAAAATCACTACAAAAAATGGAGATCTGTTTTGTATATGGAATTATGATGGCAAGATAGCACATGATGACATCATTAGAGCAACTGAAGACTTTGACATGAGATATTGCATTGGAACTGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGCAAAGTTGTTGCCTTAAAGAAACTTCATGGCTATGAGGCACAGGTTCCATCTTTTGATGAAAGTTTCAGAAATGAAGTGAGAATATTATCAGAAATAAAGCACCGACATATTGTGAAGCTTTATGGATTTTGCTTGCACAAAAGAATCATGTTTTTGATTTATCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATAATGTAGAGGCTGTCGAATTGAAATGGAGGAAAAGGGTTAACATTGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTTACCTCTCCAATTGTGCATAGAGACATATCTAGTGGCAATATCTTGCTGAACAATGAGTGGCAGCCTAGTGTCTCTGACTTTGGCACTGCTCGACTCCTTCAACATGATTCATCCAATCGAACAATAGTCGCTGGAACAATTGGATACATAGCTCCTGAGCTTGCTTATACTATGGTTGTGAGTGAAAAGTGCGATGTATATAGCTTTGGAGTAGTGACACTAGAAACTTTGATGGGAAGGCACCCTCAGGAAATGTTGTCGACACTCCAATTAGCATCAACTCAAAGCATGAAATTATGTCAACTATTAGACCAACGTCTCCCATTTCCAAATAATGCAATGGTTTTACTTGATATAATTCGTGTAGCTGCAATAGCGTTTGCGTGCTTAAATTTCAATCCTAGCTCTCGACCAACAATGAAACGTGTATCACAGAGTTTTGCCACTGAGCTTACACCATCAACCATTCCTTTGAGTGAGATTTCAATTCAACAACTTATGAGTCAAGAACTCAAAGCATTATTTCATATTGTCAACCATTGA 2259 0.3621 MCMVFVLIIWGLIVGTESSTLTSQREMEENAILKSGWWNTSDANYNISNRCNWGLIFICNKAGSITNISVTEISNKTLYGNRIHFATFNLTVFHNLESLVISFAGLEGTIPKEIGLLSNLIYLDLSFNSLVGKIPLSLGNLTTLTYLDLSFNSLVGEIPPSLGNLRKLTMLQISYNKLQGSIPHELGFIKTLVSLGLSHNFFNGSFPISIIGNLTQLEDLDISHNTIQGSIPFELGFLNNLLRLDLSYNRFDRNLPISITNLTQLEDLDLSHNLLLGTIPSNFFLSPNYEISIDLSNNLISGEIPSQIGHFQNLNLSNNNLTGIVPASLCNGYNIDISNNCLKGPFPNCFGSLTTIVNTNNNVCIDTSYNQFQHWPPHKKNNKVIHDVVIVLPIIIILILAFSLVLCLKLRHNYMTNKHANKITTKNGDLFCIWNYDGKIAHDDIIRATEDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAQVPSFDESFRNEVRILSEIKHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDNVEAVELKWRKRVNIVKGVASALSYLHHDFTSPIVHRDISSGNILLNNEWQPSVSDFGTARLLQHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVTLETLMGRHPQEMLSTLQLASTQSMKLCQLLDQRLPFPNNAMVLLDIIRVAAIAFACLNFNPSSRPTMKRVSQSFATELTPSTIPLSEISIQQLMSQELKALFHIVNH 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00177 752 Pfam Protein kinase domain 458 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00177 752 Gene3D Transferase(Phosphotransferase) domain 1 531 727 - -
Trre14g00177 752 SUPERFAMILY L domain-like 71 287 - -
Trre14g00177 752 SUPERFAMILY L domain-like 293 377 - -
Trre14g00177 752 ProSiteProfiles Protein kinase domain profile. 452 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00177 752 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 279 - -
Trre14g00177 752 FunFam MDIS1-interacting receptor like kinase 2 531 725 - -
Trre14g00177 752 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 87 182 - -
Trre14g00177 752 Gene3D Ribonuclease Inhibitor 19 189 IPR032675 -
Trre14g00177 752 ProSitePatterns Tyrosine protein kinases specific active-site signature. 576 588 IPR008266 GO:0004672|GO:0006468
Trre14g00177 752 ProSitePatterns Protein kinases ATP-binding region signature. 458 480 IPR017441 GO:0005524
Trre14g00177 752 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 139 720 - -
Trre14g00177 752 PRINTS Leucine-rich repeat signature 262 275 - -
Trre14g00177 752 PRINTS Leucine-rich repeat signature 144 157 - -
Trre14g00177 752 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 415 530 - -
Trre14g00177 752 Gene3D Phosphorylase Kinase; domain 1 413 530 - -
Trre14g00177 752 SMART LRR_typ_2 141 165 IPR003591 -
Trre14g00177 752 SMART LRR_typ_2 308 331 IPR003591 -
Trre14g00177 752 SMART LRR_typ_2 214 235 IPR003591 -
Trre14g00177 752 SMART LRR_typ_2 262 286 IPR003591 -
Trre14g00177 752 SMART LRR_typ_2 238 261 IPR003591 -
Trre14g00177 752 SUPERFAMILY Protein kinase-like (PK-like) 440 717 IPR011009 -
Trre14g00177 752 Gene3D Ribonuclease Inhibitor 191 384 IPR032675 -
Trre14g00177 752 Pfam Leucine Rich Repeat 119 141 IPR001611 GO:0005515
Trre14g00177 752 Pfam Leucine Rich Repeat 144 165 IPR001611 GO:0005515
Trre14g00177 752 Pfam Leucine Rich Repeat 313 331 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00177 Trre-Chr14 1497993 1500625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00177 96 624 Receptor kinase-like Gene Family AT4G08850 39.818 5.15e-113 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00177 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00177 - - mtr:25497510 930.243