Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00176 ATGAACTTGACAAAATATTTGGTTTCTATATTCTATGGTCCAAAAATGTGTATGGTCTTTGTTCTTATTATTTGGGGTTTGATTGTTGGGACTGAATCTTCTACATTGACATCTCAACGTGAAATGGAAGAAAATGCTATTTTGAAAAGTGGATGGTGGAACACTTCTGATGCAAACTACAACATCTCCAATCGCTGTAATTGGGGTCTGATATTTATTTGCAACAAGGCTGGAAGCATAACAAATATCAGCGTAACAGAAATCAGCAACAAAACATTATATGGAAATAGGATTCACTTTGCAACATTCAACTTGACTGTTTTCCACAATTTAGAAAGCCTTGTTATCAGTTTTGCTGGACTAGAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCTAACCTTATTTATCTTGATCTATCTTTCAATTCTCTTGTAGGTGAGATACCTCCTTCTCTAGGCAACCTTAGAAAATTAACTATGTTACAAATATCTTACAACAAGCTTCAAGGTTCCATTCCTCATGAGTTGGGATTCATTAAAACACTAGTTTCATTAGGTCTATCTCATAACTTCTTTAATGGTAGTTTTCCCATTTCCATCATAGGAAATCTCACACAATTAGAGGACCTGGACATCTCCCACAACACCATTCAAGGTTCCATTCCTTTTGAGTTGGGGTTCTTAAATAATCTGTTAAGATTAGATCTATCATACAATAGATTCGATAGAAACTTGCCTATTTCCATTACAAATCTCACACAATTAGAAGACCTTGACCTCTCCCACAATTTACTCCTTGGTACCATTCCTTCCAATTTCTTCCTATCGCCAAATTATGAAATTTCCATTGACCTCAGTAACAACCTCATCAGTGGTGAAATCCCTTCTCAGATTGGACATTTTCAAAATCTTAATTTAAGCAATAATAATCTCACTGGAATAGTTCCTGCATCTCTCTGTAATGGATATAATATAGACATTTCTAACAATTGTTTGAAGGGTCCCTTTCCGAATTGTTTTGGTTCTTTAACAACAATAGTAAATACGAACAATAATGTATGTATCGACACTTCATATAACCAATTCCAACATTGGCCACCTCACAAGAAAAATAACAAAGTAATACATGATGTTGTCATTGTCCTTCCTATCATTATTATTCTAATATTAGCCTTCTCACTTGTCTTGTGCTTGAAACTTCGTCATAATTATATGACGAACAAGCATGCAAACAAAATCACTACAAAAAATGGAGATCTGTTTTGTATATGGAATTATGATGGCAAGATAGCACATGATGACATCATTAGAGCAACTGAAGACTTTGACATGAGATATTGCATTGGAACTGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGCAAAGTTGTTGCCTTAAAGAAACTTCATGGCTATGAGGCACAGGTTCCATCTTTTGATGAAAGTTTCAGAAATGAAGTGAGAATATTATCAGAAATAAAGCACCGACATATTGTGAAGCTTTATGGATTTTGCTTGCACAAAAGAATCATGTTTTTGATTTATCAATACATGGAGAAAGGAAGCTTGTTCTCTGTCTTGTATGATAATGTAGAGGCTGTCGAATTGAAATGGAGGAAAAGGGTTAACATTGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTTACCTCTCCAATTGTGCATAGAGACATATCTAGTGGCAATATCTTGCTGAACAATGAGTGGCAGCCTAGTGTCTCTGACTTTGGCACTGCTCGACTCCTTCAACATGATTCATCCAATCGAACAATAGTCGCTGGAACAATTGGATACATAGCTCCTGAGCTTGCTTATACTATGGTTGTGAGTGAAAAGTGCGATGTATATAGCTTTGGAGTAGTGACACTAGAAACTTTGATGGGAAGGCACCCTCAGGAAATGTTGTCGACACTCCAATTAGCATCAACTCAAAGCATGAAATTATGTCAACTATTAGACCAACGTCTCCCATTTCCAAATAATGCAATGGTTTTACTTGATATAATTCGTGTAGCTGCAATAGCGTTTGCGTGCTTAAATTTCAATCCTAGCTCTCGACCAACAATGAAACGTGTATCACAGAGTTTTGCCACTGAGCTTACACCATCAACCATTCCTTTGAGTGAGATTTCAATTCAACAACTTATGAGTCAAGAACTCAAAGCATTATTTCATATTGTCAACCATTGA 2232 0.3602 MNLTKYLVSIFYGPKMCMVFVLIIWGLIVGTESSTLTSQREMEENAILKSGWWNTSDANYNISNRCNWGLIFICNKAGSITNISVTEISNKTLYGNRIHFATFNLTVFHNLESLVISFAGLEGTIPKEIGLLSNLIYLDLSFNSLVGEIPPSLGNLRKLTMLQISYNKLQGSIPHELGFIKTLVSLGLSHNFFNGSFPISIIGNLTQLEDLDISHNTIQGSIPFELGFLNNLLRLDLSYNRFDRNLPISITNLTQLEDLDLSHNLLLGTIPSNFFLSPNYEISIDLSNNLISGEIPSQIGHFQNLNLSNNNLTGIVPASLCNGYNIDISNNCLKGPFPNCFGSLTTIVNTNNNVCIDTSYNQFQHWPPHKKNNKVIHDVVIVLPIIIILILAFSLVLCLKLRHNYMTNKHANKITTKNGDLFCIWNYDGKIAHDDIIRATEDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAQVPSFDESFRNEVRILSEIKHRHIVKLYGFCLHKRIMFLIYQYMEKGSLFSVLYDNVEAVELKWRKRVNIVKGVASALSYLHHDFTSPIVHRDISSGNILLNNEWQPSVSDFGTARLLQHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVTLETLMGRHPQEMLSTLQLASTQSMKLCQLLDQRLPFPNNAMVLLDIIRVAAIAFACLNFNPSSRPTMKRVSQSFATELTPSTIPLSEISIQQLMSQELKALFHIVNH 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00176 743 Gene3D Phosphorylase Kinase; domain 1 404 521 - -
Trre14g00176 743 ProSiteProfiles Protein kinase domain profile. 443 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00176 743 FunFam Nuclear pore complex protein NUP107 36 198 - -
Trre14g00176 743 SUPERFAMILY Protein kinase-like (PK-like) 431 708 IPR011009 -
Trre14g00176 743 Pfam Leucine Rich Repeat 304 322 IPR001611 GO:0005515
Trre14g00176 743 FunFam MDIS1-interacting receptor like kinase 2 522 716 - -
Trre14g00176 743 SMART LRR_typ_2 299 322 IPR003591 -
Trre14g00176 743 SMART LRR_typ_2 205 226 IPR003591 -
Trre14g00176 743 SMART LRR_typ_2 253 277 IPR003591 -
Trre14g00176 743 SMART LRR_typ_2 229 252 IPR003591 -
Trre14g00176 743 SMART LRR_typ_2 132 156 IPR003591 -
Trre14g00176 743 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 92 711 - -
Trre14g00176 743 ProSitePatterns Protein kinases ATP-binding region signature. 449 471 IPR017441 GO:0005524
Trre14g00176 743 Pfam Leucine rich repeat 110 169 IPR001611 GO:0005515
Trre14g00176 743 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 406 521 - -
Trre14g00176 743 Pfam Protein kinase domain 449 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00176 743 Gene3D Transferase(Phosphotransferase) domain 1 522 718 - -
Trre14g00176 743 PRINTS Leucine-rich repeat signature 208 221 - -
Trre14g00176 743 PRINTS Leucine-rich repeat signature 253 266 - -
Trre14g00176 743 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 199 295 - -
Trre14g00176 743 Gene3D Ribonuclease Inhibitor 53 376 IPR032675 -
Trre14g00176 743 SUPERFAMILY L domain-like 61 369 - -
Trre14g00176 743 ProSitePatterns Tyrosine protein kinases specific active-site signature. 567 579 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00176 Trre-Chr14 1497993 1500670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00176 87 615 Receptor kinase-like Gene Family AT4G08850 39.241 2.19e-107 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00176 Pkinase 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00176 - - mtr:25497510 907.516