Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00175 ATGGTGTTCATCTCCACCGCGGTCGCCACCGACTCAAAAGCGACTAGAGAGCTTGCTGGAGTAGCAGTAGGTTCATCTGTTTGCATAGCAAGCATTGTTGCTGGACCAATATCAGGTGGGTCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCTACTTCATCCTACAAAGGAATTTGGGTTTATATGGTTGGACCAATTACTGGTGCACTTTTAGGTGCATGGTCTTATGTTGTGATTCAGGAGACAAATCATAAACAAGATATTTCAACTTCACAATCTCCTCTTTCAATCAAGTTACACAATGATATGACTGGGATTGAACTATAG 333 0.4264 MVFISTAVATDSKATRELAGVAVGSSVCIASIVAGPISGGSMNPARTLGPAIATSSYKGIWVYMVGPITGALLGAWSYVVIQETNHKQDISTSQSPLSIKLHNDMTGIEL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00175 110 PRINTS Major intrinsic protein family signature 24 46 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g00175 110 PRINTS Major intrinsic protein family signature 61 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g00175 110 PANTHER AQUAPORIN NIP2-1 1 94 IPR034294 -
Trre14g00175 110 Pfam Major intrinsic protein 2 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre14g00175 110 SUPERFAMILY Aquaporin-like 2 88 IPR023271 -
Trre14g00175 110 Gene3D Glycerol uptake facilitator protein. 1 94 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00175 Trre-Chr14 1490305 1491616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00175 1 104 Major Intrinsic Protein MIP AT5G37820 48.571 4.52e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00175 K09874 - gmx:100788071 149.058