Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00159 ATGACATCTCAACTTGAAATGGAAGAAAATGCTATTTTGAAAAGTGGATGGTGGAACACTTCTGATGCAAACTACAACATCTCCAATCGGTGTAATTGGGATCAGATATCTTGCAACAAGGCTGGAAGCATAACAAGAATCAGCATAACAGAAATCAGCAACACAATGTTATATATACATGAAAATAGGATTCAGTTTGCAACATTCAACTTGACTGTTTTCCACAATTTAGAAAGGCTTGTTATCACGTCTGTTGGACTATTATCTGCTGGACTAGAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCTAAGCTTATTTATCTTGATCTATCTTTCAATTCTCTTGTAGGTAAGATACCTCCTTCACTAGAGAATCTGACAAAACTCACTCATCTTGATCTATCTCAAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAACACTCGCTCATCTTTATCTATCTGAAAATTCTCTTGTAGGTGAGATACCTCCTTCTCTAGGCAACCTTAGAAAATTAACTTGGTTACAAATATCTTACAACAAGCTTCAAGGTTCCATTCCTCATGAGTTGGGATTCAATAAAAGTCTAGTTTTATTAATTCTATCTCATAACTTCTTTAATGGTAGTTTTCCCATTTCCATAATAGGAAATCTCACACAATTAGACTACCTGGACATCTCCCACAACACCATTCAAGGTTCCATTCCTTTTGAGTTGGGGTTCTTAAATAATCTGAAAACATTAGATCTATCATACAATAGACTCGATAGGAACTTGCCTATTTCCATTACAAATCTCACACAATTAGAATACCTTAACATCTCTCACAATTATCTCAATGGTTCCTTCCCATATTCTAACTTTGAACAATTAATGAAATTAAAATACCTTGACATATCCCACAATTTACTCCTTGGTACCCTTCCTAACAATTTTTTCCTATTGGCAAATTATGAAATTTCCATTGACCTCAGTAACAACCTCATCAATGGTGAAATCCCATCTCAGTTTGGACATTTTAAACAACTTAATTTAAGCAATAATAATTTCACTGGAATTGTTCCCCAATCTCTCTGTAATGTCATTTTGTTGGACATTTCCTATAATCATTTGAAGGGTCTCATTCCAAATTGTATTCGTCTTTATAGGATAAGAGGGAACAAGGATGTATGTACCAACATACCATATAGCCAAATCAACTTCAAAATCCAACCTTGCAAAAATAGTAATAAAGTCATGCAATATGTTTTCATTGTTCTTCCTATCCTTATTAGTTTAATCATAGCCTTCTTACTACTCATGTGCATTAAACTTCGTAATAATTCTATCAAAAACAAATATGGAAACACAATGGCAACAAAGCATGGGGATTTGTTTTGTATATGGAATTATGATGGAAAAATAGCACATGATGACATCATAAGAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCATCTGGAAATGTTGTTGCCTTAAAGAAACTTCATGGGTATGAAGCAGAGGTGCCAGCTTTTGATGATAGTTTTAGAAATGAAGTGAAAATATTATCAGAAATAAAGCACCGGCATATTGTTAAGCTTTATGGGTTTTGCTTGCACAAAAGAATCATGTTTTTGATTTATCAATACATGGAGAGAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTAGAAGCCATCGAATTGAAATGGAGAAAAAGGGTTAACATTGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTTACCTCTCCAATTGTGCATAGAGACATATCTAGTGGCAATATCTTGCTGAACAATGACTGGCAGCCTAGTGTTTCCGACTTTGGTACAGCTCGACTCCTTAAACATGATTCATCCAATCGAACAATTGTCGCTGGAACAATTGGATACATAGCTCCTGAGCTTGCTTATACTATGGTTGTGAGTGAAAAGTGCGATGTATATAGCTTTGGAGTAGTGACACTAGAAACTTTGATGGGAAGGCACCCTCAGGAAATGTTGTCTACACTTCAATTAGCATCAACTCAAAGCATGAAATTATGTCAAGTATTAGACCAACGTCTCCCATTTCCAAATAATGCAATGGTTTTACTTGATATAATTCGTGTAGCTGTAATAGCGTTTGTGTGCTTAAATTTCAATCCAACCTCTCGACCAACAATGTAA 2241 0.353 MTSQLEMEENAILKSGWWNTSDANYNISNRCNWDQISCNKAGSITRISITEISNTMLYIHENRIQFATFNLTVFHNLERLVITSVGLLSAGLEGTIPKEIGLLSKLIYLDLSFNSLVGKIPPSLENLTKLTHLDLSQNSLVGEIPPSLGNLTTLAHLYLSENSLVGEIPPSLGNLRKLTWLQISYNKLQGSIPHELGFNKSLVLLILSHNFFNGSFPISIIGNLTQLDYLDISHNTIQGSIPFELGFLNNLKTLDLSYNRLDRNLPISITNLTQLEYLNISHNYLNGSFPYSNFEQLMKLKYLDISHNLLLGTLPNNFFLLANYEISIDLSNNLINGEIPSQFGHFKQLNLSNNNFTGIVPQSLCNVILLDISYNHLKGLIPNCIRLYRIRGNKDVCTNIPYSQINFKIQPCKNSNKVMQYVFIVLPILISLIIAFLLLMCIKLRNNSIKNKYGNTMATKHGDLFCIWNYDGKIAHDDIIRATEDFDMRYCIGTGAYGSVYKAQLPSGNVVALKKLHGYEAEVPAFDDSFRNEVKILSEIKHRHIVKLYGFCLHKRIMFLIYQYMERGSLFSVLYDDVEAIELKWRKRVNIVKGVASALSYLHHDFTSPIVHRDISSGNILLNNDWQPSVSDFGTARLLKHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVTLETLMGRHPQEMLSTLQLASTQSMKLCQVLDQRLPFPNNAMVLLDIIRVAVIAFVCLNFNPTSRPTM 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00159 746 Pfam Leucine rich repeat 250 310 IPR001611 GO:0005515
Trre14g00159 746 Gene3D Transferase(Phosphotransferase) domain 1 565 746 - -
Trre14g00159 746 SUPERFAMILY L domain-like 13 389 - -
Trre14g00159 746 ProSiteProfiles Protein kinase domain profile. 486 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00159 746 ProSiteProfiles Leucine-rich repeat profile. 250 273 IPR001611 GO:0005515
Trre14g00159 746 ProSitePatterns Tyrosine protein kinases specific active-site signature. 610 622 IPR008266 GO:0004672|GO:0006468
Trre14g00159 746 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Trre14g00159 746 SUPERFAMILY Protein kinase-like (PK-like) 474 746 IPR011009 -
Trre14g00159 746 Pfam Leucine Rich repeats (2 copies) 105 145 IPR025875 -
Trre14g00159 746 SMART LRR_sd22_2 224 245 - -
Trre14g00159 746 SMART LRR_sd22_2 127 153 - -
Trre14g00159 746 SMART LRR_sd22_2 103 126 - -
Trre14g00159 746 SMART LRR_sd22_2 248 274 - -
Trre14g00159 746 SMART LRR_sd22_2 297 332 - -
Trre14g00159 746 Pfam Protein kinase domain 492 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00159 746 PRINTS Leucine-rich repeat signature 248 261 - -
Trre14g00159 746 PRINTS Leucine-rich repeat signature 130 143 - -
Trre14g00159 746 Gene3D Ribonuclease Inhibitor 200 404 IPR032675 -
Trre14g00159 746 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 49 328 - -
Trre14g00159 746 FunFam MDIS1-interacting receptor like kinase 2 565 746 - -
Trre14g00159 746 Gene3D Ribonuclease Inhibitor 2 199 IPR032675 -
Trre14g00159 746 SMART LRR_typ_2 343 366 IPR003591 -
Trre14g00159 746 SMART LRR_typ_2 127 151 IPR003591 -
Trre14g00159 746 SMART LRR_typ_2 175 199 IPR003591 -
Trre14g00159 746 SMART LRR_typ_2 297 321 IPR003591 -
Trre14g00159 746 SMART LRR_typ_2 103 126 IPR003591 -
Trre14g00159 746 SMART LRR_typ_2 248 272 IPR003591 -
Trre14g00159 746 FunFam Leucine-rich repeat receptor protein kinase MSP1 449 564 - -
Trre14g00159 746 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 164 746 - -
Trre14g00159 746 Gene3D Phosphorylase Kinase; domain 1 449 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00159 Trre-Chr14 1265490 1268361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00159 92 658 Receptor kinase-like Gene Family AT4G08850 38.925 7.37e-125 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00159 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00159 - - mtr:25497510 867.455