Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00158 ATGTGCTTGAGATTTTGTCATATTACTATTAAGAACAACCATGCAATCACAGCGACAACAACGAATGGAGATTTGTTTTGTATATGGAATTATGATGGGAAAATAGCTCATGATGACATTATCAAAGCAACAAAAGACTTTGACATGAGATATTGCATTGGAACTGGAGCATACGGAAGTGTTTACAAGGCGCAATTACCAAGTGGCAAAGTTGTTGCCTTAAAGAAACTTCATGGCTATGAAGCAGAGGTTCCATCTTTTGATGAGAGTTTCAAAAATGAAGTCAGAATATTATCAGAAATAAAGCACCGGCATATTGTTAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATTTATCAGTACATGGAAAATGGAAGCTTGTTTTCTGTTTTGTATCATGATGCAGAAGCCATGGAATTCAATTGGAGAAAAAGGGTTAACATTGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTTACTTCTCCAATAGTGCATAGAGACATATCTAGTGGCAATATCTTGCTGAACAATGACTGGCAGCCTAGTGTTGCTGATTTTGGCACAGCTCGACTCCTTCAACTAGATTCATCCAATCGAACAATAGTAGCCGGAACAGTTGGATACATAGCTCCTGAGCTTGCTTATACTATGGTTGTGAGTGAAAAGTGCGATGTATATAGCTTTGGAGTAGTGGCACTAGAAACTTTAATGGGAAGGCATCCTAAGGAAATTTTGTCGTCACTTCAATTAGCATCAACTCAAAGCACAAAATTATGTGAAGTATTAGACCAACGTCTCCCATTTTCAAACAATGCGATGGTTTTACATGACATAATTCGTGTAGCCGTAATAGCATTTGCATGCTTAAATTTCAATCCTAGCTCTCGGCCAACAATGAAACGTGTGTCACAGAGTTTTGCCTCTGAGCTAACACCATTAACCATTCCTTTGAATGAAATTTCAATGCAGCAGCTTATGAGTCAAGAACTCAAAGCATTATTTCATATTGTCAACTCATAA 1044 0.3716 MCLRFCHITIKNNHAITATTTNGDLFCIWNYDGKIAHDDIIKATKDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAEVPSFDESFKNEVRILSEIKHRHIVKLYGFCLHKRIMFLIYQYMENGSLFSVLYHDAEAMEFNWRKRVNIVKGVASALSYLHHDFTSPIVHRDISSGNILLNNDWQPSVADFGTARLLQLDSSNRTIVAGTVGYIAPELAYTMVVSEKCDVYSFGVVALETLMGRHPKEILSSLQLASTQSTKLCEVLDQRLPFSNNAMVLHDIIRVAVIAFACLNFNPSSRPTMKRVSQSFASELTPLTIPLNEISMQQLMSQELKALFHIVNS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00158 347 SUPERFAMILY Protein kinase-like (PK-like) 34 312 IPR011009 -
Trre14g00158 347 ProSiteProfiles Protein kinase domain profile. 47 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00158 347 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Trre14g00158 347 FunFam MDIS1-interacting receptor like kinase 2 126 320 - -
Trre14g00158 347 PANTHER LEUCINE RICH REPEAT KINASE 2 5 316 - -
Trre14g00158 347 ProSitePatterns Tyrosine protein kinases specific active-site signature. 171 183 IPR008266 GO:0004672|GO:0006468
Trre14g00158 347 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 10 125 - -
Trre14g00158 347 Gene3D Transferase(Phosphotransferase) domain 1 126 321 - -
Trre14g00158 347 Gene3D Phosphorylase Kinase; domain 1 10 125 - -
Trre14g00158 347 Pfam Protein kinase domain 53 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00158 Trre-Chr14 1246283 1247528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00158 17 219 Receptor kinase-like Gene Family AT4G08850 53.883 3.65e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00158 Pkinase 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00158 - - mtr:11422970 558.14