Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00157 ATGTCCTCATCTCAGCTATTTATTCATCTTTTTTTCTCTCTTTTGCACTATTATTTTTGGAGGATTCACTCATCTATCAGTATTCGTTTAAGTTATAATAAACTCACTGGAGCAATCCCCAAAAATATATGTAATGTCACTTATGTGGATATTTCCTACAACTCTTTGAAGGGTCGCATTCCACAATGTATCAATCCTTATATGATAGTAGGGAATAAAGATTTATGTTCTGATATTTCAAATGACCAAATCCACCTCCCAGTAGAATTCGAACCTTGCCCAGTTCCTAAAAAAAGTAATAAAACAGTACAATCACAGCGACAACAACGAATTAAGATTTTTGTCATTGTTTTTCCTATTGTTAATATTATACTAATATTAGCTTTCTCACTTTACATGTGCTTGAGATTTTGTCATATTACTATTAAGAACAACCATGCAATCACAGCGACAACAACGAATGGAGATTTGTTTTGTATATGGAATTATGATGGGAAAATAGCTCATGATGACATTATCAAAGCAACAAAAGACTTTGACATGAGATATTGCATTGGAACTGGAGCATACGGAAGTGTTTACAAGGCGCAATTACCAAGTGGCAAAGTTGTTGCCTTAAAGAAACTTCATGGCTATGAAGCAGAGGTTCCATCTTTTGATGAGAGTTTCAAAAATGAAGTCAGAATATTATCAGAAATAAAGCACCGGCATATTGTTAAGCTTTATGGATTCTGCTTGCACAAAAGAATCATGTTTTTGATTTATCAGTACATGGAAAATGGAAGCTTGTTTTCTGTTTTGTATCATGATGCAGAAGCCATGGAATTCAATTGGAGAAAAAGGGTTAACATTGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTTACTTCTCCAATAGTGCATAGAGACATATCTAGTGGCAATATCTTGCTGAACAATGACTGGCAGCCTAGTGTTGCTGATTTTGGCACAGCTCGACTCCTTCAACTAGATTCATCCAATCGAACAATAGTAGCCGGAACAGTTGGATACATAGCTCCTGAGCTTGCTTATACTATGGTTGTGAGTGAAAAGTGCGATGTATATAGCTTTGGAGTAGTGGCACTAGAAACTTTAATGGGAAGGCATCCTAAGGAAATTTTGTCGTCACTTCAATTAGCATCAACTCAAAGCACAAAATTATGTGAAGTATTAGACCAACGTCTCCCATTTTCAAACAATGCGATGGTTTTACATGACATAATTCGTGTAGCCGTAATAGCATTTGCATGCTTAAATTTCAATCCTAGCTCTCGGCCAACAATGAAACGTGTGTCACAGAGTTTTGCCTCTGAGCTAACACCATTAACCATTCCTTTGAATGAAATTTCAATGCAGCAGCTTATGAGTCAAGAACTCAAAGCATTATTTCATATTGTCAACTCATAA 1440 0.3569 MSSSQLFIHLFFSLLHYYFWRIHSSISIRLSYNKLTGAIPKNICNVTYVDISYNSLKGRIPQCINPYMIVGNKDLCSDISNDQIHLPVEFEPCPVPKKSNKTVQSQRQQRIKIFVIVFPIVNIILILAFSLYMCLRFCHITIKNNHAITATTTNGDLFCIWNYDGKIAHDDIIKATKDFDMRYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAEVPSFDESFKNEVRILSEIKHRHIVKLYGFCLHKRIMFLIYQYMENGSLFSVLYHDAEAMEFNWRKRVNIVKGVASALSYLHHDFTSPIVHRDISSGNILLNNDWQPSVADFGTARLLQLDSSNRTIVAGTVGYIAPELAYTMVVSEKCDVYSFGVVALETLMGRHPKEILSSLQLASTQSTKLCEVLDQRLPFSNNAMVLHDIIRVAVIAFACLNFNPSSRPTMKRVSQSFASELTPLTIPLNEISMQQLMSQELKALFHIVNS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00157 479 Pfam Protein kinase domain 185 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00157 479 FunFam MDIS1-interacting receptor like kinase 2 258 452 - -
Trre14g00157 479 Gene3D Ribonuclease Inhibitor 14 84 IPR032675 -
Trre14g00157 479 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Trre14g00157 479 Gene3D Phosphorylase Kinase; domain 1 142 257 - -
Trre14g00157 479 PANTHER LEUCINE RICH REPEAT KINASE 2 22 448 - -
Trre14g00157 479 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 142 257 - -
Trre14g00157 479 ProSiteProfiles Protein kinase domain profile. 179 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00157 479 ProSitePatterns Tyrosine protein kinases specific active-site signature. 303 315 IPR008266 GO:0004672|GO:0006468
Trre14g00157 479 SUPERFAMILY Protein kinase-like (PK-like) 167 444 IPR011009 -
Trre14g00157 479 Gene3D Transferase(Phosphotransferase) domain 1 258 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00157 Trre-Chr14 1245887 1247528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00157 28 351 Receptor kinase-like Gene Family AT4G08850 44.214 2.02e-86 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00157 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00157 - - mtr:25497510 612.068