Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00156 ATGTGGATGGTCTTTGTTCTTATTATTTGGGGTTTGATTGTTGGAACTGAATCATCTACATTGAGATCTCAACTTAAAATGGAAGAAAACGCTATATTGAATAGTGGATGGTGGAACACTTCTGATGCTAGCTACAACATCTCCAATCGGTGTAATTGGGATCAGATATTTATTTGCAACAAGGCTGGAAGCATAACAAATATCAGCATAACAGAATATGAAAATAGGATTGACTTTGCAACATTGAACTTGACTGTTTTCCACAATTTAGAAAGCCTTGTTATCACGTCTGCTGGACTAGAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCTAACCTTAATCATCTTGATCTGTCTTCCAATTTTCTGGTAGGTAAGATACCTCTTTCACTAGGAAATCTCACAAAACTCACTGGTCTTTCTCTGTCTTTCAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCATAAATCTCAATTATCTTTATCTATATAACAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAAAACTCACTAGTCTTTCTCTGTCTGGAAATTCTCTTGTAGGTGAGATACTTCCTTCACTAGGAAATCTCACAAATCTCACTGGTCTTTCTCTATCTGAAAATTCTCTTGTAGGTAAGATACCTCCTTCACTTGGAAATCTAACAAAACTCACTCATCTTTATCTATATGAAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAAAACTCACTAGTCTTTCTCTGTCTGGAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAAATCTCACTGGTCTTTCTCTATCTGAAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAAAACTCACTAGTCTTTCTCTGTCTGGAAATTCTCTTGTAGGTGAGATACTTCCTTCACTAGGAAATCTCACAAATCTCACTGGTCTTTCTCTATCTGAAAATTCTCTTGTAGGTAAGATACCTCCTTCACTTGGAAATCTAACAAAACTCACTCATCTTTATCTATATGAAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAAAACTCACTAGTCTTTCTCTGTCTGGAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACAAATCTCACTGGTCTTTCTCTATCTGAAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCATAAATCTCAATTATCTTACTCTATCTGAAAATTCTCTTGTAGGTGAGATACCTCCTTCACTAGGAAATCTCACACAATTAGTGTACCTGGACATCTCTCACAACACCATTCAAGGTTCCATTCCTTTTGAGTTGGGGTTCTTAAATAATCTGACAACATTAGATCTATCATACAATTTACTCTTTGGTGAAATCCCTTCTCAGTTTGGACATTTTAAACAACTTAATTTAAGCAATAATAATCTCACTGGAAATGTTCCCCAATCTCTATGTAATGTCAGTTTGCTGGACATTTCCTATAATAATTTGAAGGGTCGCATTCCAAATTGTATTCGTCTTTATAGGATAAGAGGGAACAAGGATGTATGTACCAACATACCATATAGCCAAATCAACTTCAAAATCCAACCTTGCAAAAATAGTAATAAAGTCATGCAATATGTTTTCATTGTTCTTCCTATCCTTATTAGTTTAATCATAGCCTTCTTACTACTCATGTGCATTAAACTTCGTAATAATTCTATCAAAAACAAATATGGAAACACAATGGCAACAAAGCATGGGGATTTGTTTTGTATATGGAATTATGATGGAAAAATAGCACATGATGACATCATAAGAGCAACAGAAGACTTTGACATGAGATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCATCTGGAAATGTTGTTGCCTTAAAGAAACTTCATGGGTATGAAGCAGAGGTGCCAGCTTTTGATGATAGTTTTAGAAATGAAGTGAAAATATTATCAGAAATAAAGCACCGGCATATTGTTAAGCTTTATGGGTTTTGCTTGCACAAAAGAATCATGTTTTTGATTTATCAATACATGGAGAGAGGAAGCTTGTTCTCTGTCTTGTATGATGATGTAGAAGCCATCGAATTGAAATGGAGAAAAAGGGTTAACATTGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTTACCTCTCCAATTGTGCATAGAGACATATCTAGTGGCAATATCTTGCTGAACAATGACTGGCAGCCTAGTGTTTCCGACTTTGGTACAGCTCGACTCCTTAAACATGATTCATCCAATCGAACAATTGTCGCTGGAACAATTGGATACATAGCTCCTGAGCTTGCTTATACTATGGTTGTGAGTGAAAAGTGCGATGTGTATAGCTTTGGAGTAGTGACACTAGAAACTTTGATGGGAAGGCACCCTCAGGAAATGTTGTCGACACTTCAATTAGCATCAACTCAAAGCATGAAATTATGTCAACTATTAGACCAACGTCTCCCATTTCCAAATAATGCAATGGTTTTACTTGATATAATTCGTGTAGCTGCAATAGCGTTTGCGTGCTTAAATTTCAATCCTAGCTCTCGACCAACAATGAAACGTGTATCACAGAGTTTTGCCACTGAGCTTACACCATTAACCATTCCTTTGAGTGAGATTTCAATGCAGCAACTTATGAGTCAAGAACTCAAAGCATTGTTTCATATTGTCAAACATTGA 2808 0.365 MWMVFVLIIWGLIVGTESSTLRSQLKMEENAILNSGWWNTSDASYNISNRCNWDQIFICNKAGSITNISITEYENRIDFATLNLTVFHNLESLVITSAGLEGTIPKEIGLLSNLNHLDLSSNFLVGKIPLSLGNLTKLTGLSLSFNSLVGEIPPSLGNLINLNYLYLYNNSLVGEIPPSLGNLTKLTSLSLSGNSLVGEILPSLGNLTNLTGLSLSENSLVGKIPPSLGNLTKLTHLYLYENSLVGEIPPSLGNLTKLTSLSLSGNSLVGEIPPSLGNLTNLTGLSLSENSLVGEIPPSLGNLTKLTSLSLSGNSLVGEILPSLGNLTNLTGLSLSENSLVGKIPPSLGNLTKLTHLYLYENSLVGEIPPSLGNLTKLTSLSLSGNSLVGEIPPSLGNLTNLTGLSLSENSLVGEIPPSLGNLINLNYLTLSENSLVGEIPPSLGNLTQLVYLDISHNTIQGSIPFELGFLNNLTTLDLSYNLLFGEIPSQFGHFKQLNLSNNNLTGNVPQSLCNVSLLDISYNNLKGRIPNCIRLYRIRGNKDVCTNIPYSQINFKIQPCKNSNKVMQYVFIVLPILISLIIAFLLLMCIKLRNNSIKNKYGNTMATKHGDLFCIWNYDGKIAHDDIIRATEDFDMRYCIGTGAYGSVYKAQLPSGNVVALKKLHGYEAEVPAFDDSFRNEVKILSEIKHRHIVKLYGFCLHKRIMFLIYQYMERGSLFSVLYDDVEAIELKWRKRVNIVKGVASALSYLHHDFTSPIVHRDISSGNILLNNDWQPSVSDFGTARLLKHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVTLETLMGRHPQEMLSTLQLASTQSMKLCQLLDQRLPFPNNAMVLLDIIRVAAIAFACLNFNPSSRPTMKRVSQSFATELTPLTIPLSEISMQQLMSQELKALFHIVKH 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00156 935 ProSiteProfiles Protein kinase domain profile. 635 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00156 935 Pfam Leucine Rich repeats (2 copies) 352 393 IPR025875 -
Trre14g00156 935 ProSitePatterns Tyrosine protein kinases specific active-site signature. 759 771 IPR008266 GO:0004672|GO:0006468
Trre14g00156 935 Gene3D Phosphorylase Kinase; domain 1 599 713 - -
Trre14g00156 935 SMART LRR_sd22_2 231 250 - -
Trre14g00156 935 SMART LRR_sd22_2 471 490 - -
Trre14g00156 935 SMART LRR_sd22_2 255 281 - -
Trre14g00156 935 SMART LRR_sd22_2 351 370 - -
Trre14g00156 935 SMART LRR_sd22_2 183 209 - -
Trre14g00156 935 SMART LRR_sd22_2 447 468 - -
Trre14g00156 935 SMART LRR_sd22_2 375 401 - -
Trre14g00156 935 SMART LRR_sd22_2 111 143 - -
Trre14g00156 935 SMART LRR_sd22_2 303 329 - -
Trre14g00156 935 SUPERFAMILY Protein kinase-like (PK-like) 623 900 IPR011009 -
Trre14g00156 935 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Trre14g00156 935 FunFam Leucine-rich repeat receptor-like protein kinase TDR 288 563 - -
Trre14g00156 935 Gene3D Ribonuclease Inhibitor 19 173 IPR032675 -
Trre14g00156 935 SMART LRR_typ_2 279 303 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 375 399 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 159 183 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 351 374 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 207 230 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 255 278 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 471 494 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 423 447 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 231 254 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 327 350 IPR003591 -
Trre14g00156 935 SMART LRR_typ_2 111 135 IPR003591 -
Trre14g00156 935 FunFam Nuclear pore complex protein NUP107 19 177 - -
Trre14g00156 935 PANTHER LEUCINE RICH REPEAT KINASE 2 256 904 - -
Trre14g00156 935 SUPERFAMILY L domain-like 39 317 - -
Trre14g00156 935 Gene3D Transferase(Phosphotransferase) domain 1 714 908 - -
Trre14g00156 935 SUPERFAMILY RNI-like 224 536 - -
Trre14g00156 935 FunFam MDIS1-interacting receptor like kinase 2 714 908 - -
Trre14g00156 935 Pfam Leucine Rich Repeat 113 135 IPR001611 GO:0005515
Trre14g00156 935 Pfam Leucine Rich Repeat 473 495 IPR001611 GO:0005515
Trre14g00156 935 Pfam Leucine Rich Repeat 161 183 IPR001611 GO:0005515
Trre14g00156 935 Gene3D Ribonuclease Inhibitor 366 464 IPR032675 -
Trre14g00156 935 Gene3D Ribonuclease Inhibitor 174 272 IPR032675 -
Trre14g00156 935 Pfam Leucine rich repeat 257 316 IPR001611 GO:0005515
Trre14g00156 935 FunFam Leucine-rich repeat receptor protein kinase MSP1 598 713 - -
Trre14g00156 935 FunFam Leucine-rich repeat receptor protein kinase EMS1 202 287 - -
Trre14g00156 935 Gene3D Ribonuclease Inhibitor 273 365 IPR032675 -
Trre14g00156 935 Pfam Protein kinase domain 641 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00156 935 Gene3D Ribonuclease Inhibitor 465 561 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00156 Trre-Chr14 1237814 1241072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00156 83 807 Receptor kinase-like Gene Family AT4G08850 43.316 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre14g00156 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00156 - - mtr:25501173 981.859