Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00150 ATGGGTTATCTTAGAAAAGTTTCCAAAACCTTAAAACAATCAAATTATGTTTCATTATTGTTCAATTTCAATTTCACTCCATTATCAAACAGAATAACCCATCAAAGATTTTCCTTAACACGTGCACTTTTCTGTACCCAATCACGTCAAAATAGTACAAAAGAGAAACCCATTATAGATTTGAGTCAGTACCCTCCAGAGCTTGTGAGAAATTTCTCAATCATTGCACATGTTGATCATGGAAAATCTACTCTTGCTGATAGGCTTCTTGAACTCACTGGAACTATTAAGAAAGGACTTGGCCAGCCTCAGTATCTTGATAAATTGCAGGTGGAGAGAGAAAGGGGAATCACGGTTAAAGCTCAGACAGCAACAATGTTTTATAAGAACATCATAAATGGCGATGATTCTCATGATGGAAAGGAGTCACCTAATTATTTGTTGAATCTTATCGACACACCTGGGCATGTAGATTTCAGTTATGAAGTGTCAAGGTCACTAGCTGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAAGGAGTTCAAGCACAAACCGTTGCTAACTTTTACCTTGCCTTCGAATCTAACTTATCAATTATACCTGTCATAAACAAGATAGATCAGCCAACTGCTGATCCTGACCGTGTTAAAGCTCAATTGAAATCGATGTTTGATCTTGACACGAGTGATGTATTGCTAACATCGGCGAAAACTGGGAAGGGTCTTGAACATGTTCTTCCAGCAGTCATTGAGCGGATACCTCCTCCTCCTGGGAAGAGTGACTCTTCTTTGCGTATGCTTTTACTTGATTCATATTTTGATGAATACAGAGGGGTGATATGCCATGTTGCTATTGTTGATGGTGCCCTGCGCAAGGGGGATAAGATTTCTTCGGCGGCCACTGGCAAGTCATATGAAGCTTTGGATATAGGCATCATGCATCCTGAACTTACGCCTACTGGAATCTTGTTTACTGGACAAGTTGGTTATGTTATAAGTGGCATGCGGTCGACCAAAGAGGCACGCATTGGAGATACAATTTACCATACACGAAGCACTGTGGATGTGGAACCTCTTCCAGGCTTCAAACCAGCAAAACATATGGTTTTTTCTGGTCTTTTTCCAGCTGATGGATCTGATTTTGAAGCTCTCAACCATGCAATAGAGAAGCTTACATGCAATGATGCCAGTGTGTCTGTTGCTAAAGAAACGAGCACTGCTCTAGGTCTAGGGTTCAGGTGTGGATTTTTAGGCCTTCTTCACATGGATGTTTTTCATCAAAGGCTTGAACAGGAATATGGAGCTCATATTATCTCAACCGTTCCTACCGTGCCTTATATATATGAGTATTCTGATGGAAGCAAATTAGAAGTTCAGAATCCTGCTGCATTACCATCTAATCCCAAGCAACGAGTGGTAGCCTGTTGGGAACCCACAGTAATAGCTACTATAGTTATGCCTAGTGAGTATGTTGGACCTGTTATCACCCTTCTCTCTGAGCGTAGGGGTGAACAGTTGGAGTACTCGTTCATTGACAGTCAACGAGTTTTCATGAAGTATCGTCTTCCATTGAGGGAAGTTGTTATTGACTTTTATAATGAATTGAAGAGTATAACATCAGGCTATGCATCATTTGATTACGAGGATTCAGATTATCAACAATCTGATCTGGTGAAACTTGATATTCTCTTGAATGGACAACCGGTTGATGCCATGTCAACCATTGTTCATAACTCGAAATCATATCGTGTTGGGCGTGAATTGGTGGACAAATTGAAGAAAGTCATAGACAGGCAAATGTTCGAGATATCCATACAAGCTGCTATTGGGTCAAAAATTATAGCAAGGGAGACTATTACGGCTATGAGAAAGAATGTTCTTGCCAAGTGTTATGGTGGTGATGTTTCACGAAAGAGGAAGCTATTAGAGAAGCAAAAGGAAGGTAAAAAGCGAATGAAACGTGTTGGTTCTGTTGATGTACCACAAGAAGCATTCCATGAACTATTGAAGGTTTCATAG 2025 0.4049 MGYLRKVSKTLKQSNYVSLLFNFNFTPLSNRITHQRFSLTRALFCTQSRQNSTKEKPIIDLSQYPPELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGLGQPQYLDKLQVERERGITVKAQTATMFYKNIINGDDSHDGKESPNYLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLSIIPVINKIDQPTADPDRVKAQLKSMFDLDTSDVLLTSAKTGKGLEHVLPAVIERIPPPPGKSDSSLRMLLLDSYFDEYRGVICHVAIVDGALRKGDKISSAATGKSYEALDIGIMHPELTPTGILFTGQVGYVISGMRSTKEARIGDTIYHTRSTVDVEPLPGFKPAKHMVFSGLFPADGSDFEALNHAIEKLTCNDASVSVAKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHIISTVPTVPYIYEYSDGSKLEVQNPAALPSNPKQRVVACWEPTVIATIVMPSEYVGPVITLLSERRGEQLEYSFIDSQRVFMKYRLPLREVVIDFYNELKSITSGYASFDYEDSDYQQSDLVKLDILLNGQPVDAMSTIVHNSKSYRVGRELVDKLKKVIDRQMFEISIQAAIGSKIIARETITAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDVPQEAFHELLKVS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00150 674 FunFam Translation factor GUF1, mitochondrial 362 443 - -
Trre14g00150 674 NCBIfam translation elongation factor 4 69 673 IPR006297 GO:0005525
Trre14g00150 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 280 IPR027417 -
Trre14g00150 674 SUPERFAMILY EF-G C-terminal domain-like 478 572 IPR035647 -
Trre14g00150 674 SUPERFAMILY EF-G C-terminal domain-like 370 447 IPR035647 -
Trre14g00150 674 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 67 259 IPR000795 GO:0003924|GO:0005525
Trre14g00150 674 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 107 122 IPR031157 -
Trre14g00150 674 FunFam Translation factor GUF1, mitochondrial 261 359 - -
Trre14g00150 674 Hamap Elongation factor 4 [lepA]. 65 674 IPR006297 GO:0005525
Trre14g00150 674 Gene3D - 558 632 IPR038363 -
Trre14g00150 674 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Trre14g00150 674 PRINTS GTP-binding elongation factor signature 71 84 IPR000795 GO:0003924|GO:0005525
Trre14g00150 674 PRINTS GTP-binding elongation factor signature 114 122 IPR000795 GO:0003924|GO:0005525
Trre14g00150 674 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Trre14g00150 674 Gene3D Elongation Factor G (Translational Gtpase), domain 3 362 443 - -
Trre14g00150 674 FunFam Translation factor GUF1, mitochondrial 444 556 - -
Trre14g00150 674 FunFam Translation factor GUF1, mitochondrial 558 632 - -
Trre14g00150 674 Pfam Elongation factor Tu GTP binding domain 69 256 IPR000795 GO:0003924|GO:0005525
Trre14g00150 674 FunFam Elongation factor 4 66 260 - -
Trre14g00150 674 Pfam Elongation factor G C-terminus 479 564 IPR000640 -
Trre14g00150 674 CDD EF4_III 369 444 - -
Trre14g00150 674 CDD EF4_II 266 351 - -
Trre14g00150 674 Gene3D - 67 260 IPR027417 -
Trre14g00150 674 Gene3D - 444 557 - -
Trre14g00150 674 Pfam GTP-binding protein LepA C-terminus 566 672 IPR013842 -
Trre14g00150 674 Gene3D Translation factors 261 358 - -
Trre14g00150 674 SUPERFAMILY Translation proteins 257 356 IPR009000 -
Trre14g00150 674 PANTHER TRANSLATION FACTOR GUF1-RELATED 41 673 IPR006297 GO:0005525
Trre14g00150 674 NCBIfam small GTP-binding protein domain 73 247 IPR005225 GO:0005525
Trre14g00150 674 CDD LepA 70 258 - -
Trre14g00150 674 CDD lepA_C 479 558 IPR035654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00150 Trre-Chr14 1184263 1189881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00150 69 210 Eukaryotic Initiation Factors Gene Family AT1G56070 41.667 2.44e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00150 K21594 - gmx:100781092 1186.02