Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00149 ATGTCTAGTCCAAGTAGTTCAGAGATTGAAGAGAAGAGAGTTACTTCAATTTTCAATGAAGCTGATTTCTCTACTCAACAAGAGGTTACAAAGGAAGACAAACTAATAGATGCAAAATCCGAAATGGGTGAGGTGAAAGAAGAAAACGAAAGATTGAAGATGATGCTTTCGCGAGTTGAAAAAGACTACAACTCGCTTCAACTCCGTTTCTTTGACATTGTTAACAAAGAAGTTTCTAACAAAGGTGTAGAAGATTCATCAACTTTACATGACGAAATCGATGAAGAACCCGAGCTTGTGTCACTTTGCCTTGGAAGAAGTCCAAATGAGTACAAGAAAGAAGCAAAAATTGATCAAAACTCAAACAAGCCTAAAGAAAAAGAAGACATGGAAGTTAATCTTAGTCTTGGATTAGATTCCAAATATATGTTGTCTATGGAGTTAGTATCTGATTTGAGTCCATTGAATAGCTCAGAAGAATTACCAAAGGAAGTTGAAGAAAAAGGAACATTATTGTCATCAACAAATAAATCACCAAAAGTGATAAATGTAGATGATGATATTTCAGATCAAATGCCAGCTAAGAGAGTTAGAGTATCTGTGAGAGCTAAATGTGACACTCCCACGATGAATGATGGATGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGAAAACAGGTACAAAGATGTGCTGATGACTTGTCCATATTAATCACAACATATGAAGGAACACACAACCATCCTCTTCAAGTTACAGCATCAGCCATGGCATACACAACTTCAGCTGCAGCTTCAATGATGTTATCAGGCTCATCAACATCATCATCATCATCACATCAAAATATTCAACATCAAAATATTCATCATCAAAATTCCACATCTTTTGGAAATTCTCCAACACTACTCAATGGCCTAAATTTCAACAATCACCAATTTGAACAATCAAGAACACCAAAACAACATTTCTTTATTCCACAAAACCATAATAGTTTGTTCCCAACCATCACTCTTGACCTAACTTCTCCTTCATCCATATCATCAACATCATCAAACATAGCTTCAATTCCAAGATTTTCTCCAAATAATCTTAATTTTTGTTCCACACAACCACCAAATTTCACACCAACATCAACCATTTGGAACAACAACAAATTAGGGTTAGGGTTCATTAACAATAACACAATACCTATTGAAAAATCACAAATTAGGCCTTTTAACCATTTCCAAGAAAATTTCTATCAAAACCAAAATTGTGTGACAAATTACCAAACACCTTCGAGGCAAGCATTGGCAGAAACAATTAGCAAAGCAATAAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCCGCAGTTACATCGATTGTAGGACAAGGATCAAACAATGGTGGAAATCAAGAAGAGTTAAGAGATAATGGTTTAGGTTCTGGATTGAATTTGAAACTTGGTGAGTATCCTCAAATGGTTTCAAACAATTTGTTGAATCAAAATGGGAAAGGATGTTTGAAGGGTTCATACTTCAAAAGGTTGTCACCAACAACAAGTTCACAAGCCAAAAATTTCATGCTTCTTCAACCATCATTGCCAAATTCTCTTTCTAAGAGTAACACAACTAGACCTTCATCCATTGTTAATCATATCAATCATTGTGATCCAAATATGAAGACACATCATTAG 1740 0.3557 MSSPSSSEIEEKRVTSIFNEADFSTQQEVTKEDKLIDAKSEMGEVKEENERLKMMLSRVEKDYNSLQLRFFDIVNKEVSNKGVEDSSTLHDEIDEEPELVSLCLGRSPNEYKKEAKIDQNSNKPKEKEDMEVNLSLGLDSKYMLSMELVSDLSPLNSSEELPKEVEEKGTLLSSTNKSPKVINVDDDISDQMPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDLSILITTYEGTHNHPLQVTASAMAYTTSAAASMMLSGSSTSSSSSHQNIQHQNIHHQNSTSFGNSPTLLNGLNFNNHQFEQSRTPKQHFFIPQNHNSLFPTITLDLTSPSSISSTSSNIASIPRFSPNNLNFCSTQPPNFTPTSTIWNNNKLGLGFINNNTIPIEKSQIRPFNHFQENFYQNQNCVTNYQTPSRQALAETISKAISTDPSLHSVIAAAVTSIVGQGSNNGGNQEELRDNGLGSGLNLKLGEYPQMVSNNLLNQNGKGCLKGSYFKRLSPTTSSQAKNFMLLQPSLPNSLSKSNTTRPSSIVNHINHCDPNMKTHH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00149 579 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00149 579 MobiDBLite consensus disorder prediction 551 579 - -
Trre14g00149 579 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 22 486 IPR044810 GO:0003700
Trre14g00149 579 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00149 579 Gene3D WRKY domain 195 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g00149 579 FunFam probable WRKY transcription factor 31 195 272 - -
Trre14g00149 579 Pfam WRKY DNA -binding domain 211 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00149 579 MobiDBLite consensus disorder prediction 551 570 - -
Trre14g00149 579 Coils Coil 35 69 - -
Trre14g00149 579 SUPERFAMILY WRKY DNA-binding domain 204 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00149 Trre-Chr14 1179215 1182310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00149 42 478 WRKY Transcription Factor Family AT5G15130 44.805 6.97e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g00149 WRKY 5.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00149 - - psat:127130037 882.478