Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00148 ATGTCAAAAATGTCTAGTCCAAGTAGTTCAGAGATTGAAGAGAAGAGAGTTACTTCAATTTTCAATGAAGCTGATTTCTCTACTCAACAAGAGGTTACAAAGGAAGACAAACTAATAGATGCAAAATCCGAAATGGGTGAGGTGAAAGAAGAAAACGAAAGATTGAAGATGATGCTTTCGCGAGTTGAAAAAGACTACAACTCGCTTCAACTCCGTTTCTTTGACATTGTTAACAAAGAAGTTTCTAACAAAGGTGTAGAAGATTCATCAACTTTACATGACGAAATCGATGAAGAACCCGAGCTTGTGTCACTTTGCCTTGGAAGAAGTCCAAATGAGTACAAGAAAGAAGCAAAAATTGATCAAAACTCAAACAAGCCTAAAGAAAAAGAAGACATGGAAGTTAATCTTAGTCTTGGATTAGATTCCAAATATATGTTGTCTATGGAGTTAGTATCTGATTTGAGTCCATTGAATAGCTCAGAAGAATTACCAAAGGAAGTTGAAGAAAAAGGAACATTATTGTCATCAACAAATAAATCACCAAAAGTGATAAATGTAGATGATGATATTTCAGATCAAATGCCAGCTAAGAGAGTTAGAGTATCTGTGAGAGCTAAATGTGACACTCCCACGATGAATGATGGATGTCAATGGAGGAAATATGGACAGAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGAAAACAGGTACAAAGATGTGCTGATGACTTGTCCATATTAATCACAACATATGAAGGAACACACAACCATCCTCTTCAAGTTACAGCATCAGCCATGGCATACACAACTTCAGCTGCAGCTTCAATGATGTTATCAGGCTCATCAACATCATCATCATCATCACATCAAAATATTCAACATCAAAATATTCATCATCAAAATTCCACATCTTTTGGAAATTCTCCAACACTACTCAATGGCCTAAATTTCAACAATCACCAATTTGAACAATCAAGAACACCAAAACAACATTTCTTTATTCCACAAAACCATAATAGTTTGTTCCCAACCATCACTCTTGACCTAACTTCTCCTTCATCCATATCATCAACATCATCAAACATAGCTTCAATTCCAAGATTTTCTCCAAATAATCTTAATTTTTGTTCCACACAACCACCAAATTTCACACCAACATCAACCATTTGGAACAACAACAAATTAGGGTTAGGGTTCATTAACAATAACACAATACCTATTGAAAAATCACAAATTAGGCCTTTTAACCATTTCCAAGAAAATTTCTATCAAAACCAAAATTGTGTGACAAATTACCAAACACCTTCGAGGCAAGCATTGGCAGAAACAATTAGCAAAGCAATAAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCCGCAGTTACATCGATTGTAGGACAAGGATCAAACAATGGTGGAAATCAAGAAGAGTTAAGAGATAATGGTTTAGGTTCTGGATTGAATTTGAAACTTGGTGAGTATCCTCAAATGGTTTCAAACAATTTGTTGAATCAAAATGGGAAAGGATGTTTGAAGGGTTCATACTTCAAAAGGTTGTCACCAACAACAAGTTCACAAGCCAAAAATTTCATGCTTCTTCAACCATCATTGCCAAATTCTCTTTCTAAGAGTAACACAACTAGACCTTCATCCATTGTTAATCATATCAATCATTGTGATCCAAATATGAAGACACATCATTAG 1749 0.3551 MSKMSSPSSSEIEEKRVTSIFNEADFSTQQEVTKEDKLIDAKSEMGEVKEENERLKMMLSRVEKDYNSLQLRFFDIVNKEVSNKGVEDSSTLHDEIDEEPELVSLCLGRSPNEYKKEAKIDQNSNKPKEKEDMEVNLSLGLDSKYMLSMELVSDLSPLNSSEELPKEVEEKGTLLSSTNKSPKVINVDDDISDQMPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDLSILITTYEGTHNHPLQVTASAMAYTTSAAASMMLSGSSTSSSSSHQNIQHQNIHHQNSTSFGNSPTLLNGLNFNNHQFEQSRTPKQHFFIPQNHNSLFPTITLDLTSPSSISSTSSNIASIPRFSPNNLNFCSTQPPNFTPTSTIWNNNKLGLGFINNNTIPIEKSQIRPFNHFQENFYQNQNCVTNYQTPSRQALAETISKAISTDPSLHSVIAAAVTSIVGQGSNNGGNQEELRDNGLGSGLNLKLGEYPQMVSNNLLNQNGKGCLKGSYFKRLSPTTSSQAKNFMLLQPSLPNSLSKSNTTRPSSIVNHINHCDPNMKTHH 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00148 582 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00148 582 MobiDBLite consensus disorder prediction 554 573 - -
Trre14g00148 582 Coils Coil 38 72 - -
Trre14g00148 582 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 489 IPR044810 GO:0003700
Trre14g00148 582 FunFam probable WRKY transcription factor 31 198 275 - -
Trre14g00148 582 MobiDBLite consensus disorder prediction 554 582 - -
Trre14g00148 582 SUPERFAMILY WRKY DNA-binding domain 207 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g00148 582 Gene3D WRKY domain 198 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre14g00148 582 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre14g00148 582 Pfam WRKY DNA -binding domain 214 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00148 Trre-Chr14 1179206 1182310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00148 45 481 WRKY Transcription Factor Family AT5G15130 44.805 8.46e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre14g00148 WRKY 5.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00148 - - psat:127130037 879.011