Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre14g00113 | ATGAGCCGTAGAGTGAGGAGGAAAGTGGCAAGGAAAGGCAAAGGGAATGTGGTTTCGAGTTTCCCTGAAATTCAAGACGAGGTTGCGGATTTGGAGCCCCAAGGTGTTGTTGATTGGAGGAGTTTACCTGATGATACAGTAATTCAGCTATTGTCATGTCTGAGTTATCGAGACCGAGCTAGTTTATCAGCAAGTTGTAAGACATGGAGGGTTCTTGGTAACTCCCCGTGTTTGTGGACTTCTTTGGATCTTCGTTCGCACAAGTTTGATGCCAATGTTGCATCTTTACTTGCTTCTAGATGTGTGCATCTTCAGAAGCTTAGGTTTCGTGGTGCGGAGGCTGCTGAGGCACTACTTCATCTTCGAGCTAAGAACTTGCGCGAATTAAGCGGTGACGGTTGCAGGAAGATGACTGATGCAACTCTTGCTGTAATTGCAGCTCGGCATGAGTCACTTCAGAGTCTTCAGCTTGGACCAGATTTTTGTGACAAAGTTACTAGTGATGCTATAAAAGCAATAGCTCACTGCTGTCCCAATTTGAATAAACTCAGGCTCTCAGGCATTAGGGATGTAAATGCTGATGCAATTAATGCATTGGCTACCTATTGTCCAAACTTGACTGATATCGGATTCATTGACTGCCTGAGTGTTGACGAGCTTGCATTGGGAAATGTGCAATCGGTTCGTTTTCTTTCTGTTGCGGGGACACCAAGTATGAAGTGGAGTGTGGTTTCACATCTTTGGCACAAGCTTCCTAACCTGATTGGATTAGATGTTTCAAGAACTGATATTGGTCCGTCTGCTGTTTCAAGATTGTTATCCTTATCACAAAATTTGAAGATTTTGATTGCTTTGAGTTGTCCTATGCTCGAAGAAGAGACTAGCTTTTCTGCTAGTAAATATAAAAACAAGTTGTTGATTTCCCTATCAACGGATATTTTTAAAGGACTGGGTTCTTTATTTTTCGATAATACAAATAGAGGAAAGAATGTGTTTTTGGACTGGAGGACTTCAAAGAGTAATAATGATAAGGACCTTGATGAAATTATACCTTGGCTTGAATGGATGCTATCACATATACTTCTGCGTTCTGCTGAGAGCCCTCAACAGGGAGGTCTTGATAATTTCTGGGTTGAACAAGGTGCGTCGCTTTTGCTTAGTCTAATGCAGAGTTCTCAAGAGGATGTTCAGGAGAGGGCAGCCACAGGCCTTGCAACTTTTGTTGTAATTGATGATGAAAATGCTAGCATCGATTGTGGAAGAGCTGAAGCAGTTATGCGGGATGGTGGTATACGCCTCCTTCTTGGACTTGCAAAATCTTACAGGGAAGGGCTTCAGTCTGAGGCAGCTAAGGCTATTGCGAATTTGTCTGTGAATGCCAATGTGGCGAAGGCGGTTGCAGAAGAGGGTGGGATTGAGATTCTCGCTAGTTTGGCCAGGTCAATGAACAAACTGGTGGCTGAAGAAGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAACACAAGGGTGCCATTGCTGAAGCTGGTGGAGTACAAGCTTTAGTGGATCTTATATTCAAGTGGTCCTCTACTGGAGATGGAGTTTTAGAACGTGCAGCTGGTGCATTGGCTAATTTGGCTGCTGACGACAAGTGTAGTACAGAGGTTGCACTAGCAGGAGGCGTACATGCTCTAGTGATGCTTGCACGTAACTGTAAATACGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAATTTAGCTGCTCATGGAGATAGCAACAGTAACAATGCCGCTGTCGGACAAGAAGCGGGTGCTCTTGAAGCTCTTGTTCAACTTACACGTTCTCCCCATGAGGGTGTCAGGCAAGAAGCTGCTGGTGCACTTTGGAATTTGTCATTTGACGATAGAAATCGAGAGGCCATTGCAGCAGCTGGCGGCGTTCAAGCTTTGGTTGCTCTAGCCCAATCTTGTTCTAATGCTTCCCCTGGACTTCAAGAGAGGGCTGCTGGTGCTCTATGGGGATTGTCAGTTTCTGAAGCCAATAGCATTGCCATTGGACGAGAAGGGGGAGTTGCACCTCTGATTGCTCTGGCACGGTCCGAAGCAGAGGATGTTCATGAAACGGCTGCAGGAGCACTATGGAATCTTGCTTTCAACCCTGGTAATGCTTTACGAATAGTGGAGGAAGGAGGAGTAGCTGCACTTGTTGATCTCTGTTCTTCATCAGTGTCAAAAATGGCTCGATTTATGGCAGCATTGGCTTTGGCCTACATGTTTGATGGGAGAATGGATGAATTCGCTTTAGTCGGCACCTTGTCAGAAAGTGTTTCTAAGAGTGTGGGCCTGGATGGAGCCAGAAGGATGGCTCTGAAACACATTGAAGCATTTGTACGGATGTTTTCTAATCAACAAGCATTTGCGGCTGCTGCTGCATCATCAGCTCCTGCAGCACTTGCACAGGTTACTGAAAGCGCTCGTATTCAAGAAGCGGGACATCTTAGATGCAGTGGTGCTGAAGTTGGAAGATTTGTTACTATGCTACGAAATCCGTCGTCAATACTCAAAGCTTGTGCAGCATTTGCTCTTCTACAGTTTACAATTCCTGGTGGACGACATGCTATACACCATGCCAGCCTCATGCAGAATGCAGGTGCAGCAAGAGTTCTGCGAAGTGCAGCTGCCGCCGCAACCGCACCTCTTGAAGCAAAAATCTTTGCCAGGATTGTTCTTCGTAATCTCGAGTATCACCACCTAGAGCATACTGTTTAG | 2760 | 0.4572 | MSRRVRRKVARKGKGNVVSSFPEIQDEVADLEPQGVVDWRSLPDDTVIQLLSCLSYRDRASLSASCKTWRVLGNSPCLWTSLDLRSHKFDANVASLLASRCVHLQKLRFRGAEAAEALLHLRAKNLRELSGDGCRKMTDATLAVIAARHESLQSLQLGPDFCDKVTSDAIKAIAHCCPNLNKLRLSGIRDVNADAINALATYCPNLTDIGFIDCLSVDELALGNVQSVRFLSVAGTPSMKWSVVSHLWHKLPNLIGLDVSRTDIGPSAVSRLLSLSQNLKILIALSCPMLEEETSFSASKYKNKLLISLSTDIFKGLGSLFFDNTNRGKNVFLDWRTSKSNNDKDLDEIIPWLEWMLSHILLRSAESPQQGGLDNFWVEQGASLLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSYREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILASLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGVQALVDLIFKWSSTGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAAAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSEANSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVAALVDLCSSSVSKMARFMAALALAYMFDGRMDEFALVGTLSESVSKSVGLDGARRMALKHIEAFVRMFSNQQAFAAAAASSAPAALAQVTESARIQEAGHLRCSGAEVGRFVTMLRNPSSILKACAAFALLQFTIPGGRHAIHHASLMQNAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHHLEHTV | 919 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre14g00113 | 919 | Pfam | F-box-like | 39 | 85 | IPR001810 | GO:0005515 | |
| Trre14g00113 | 919 | FunFam | Protein ARABIDILLO 2 | 355 | 503 | - | - | |
| Trre14g00113 | 919 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 601 | 643 | IPR000225 | GO:0005515 | |
| Trre14g00113 | 919 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 642 | 687 | IPR000225 | GO:0005515 | |
| Trre14g00113 | 919 | Gene3D | - | 681 | 760 | IPR011989 | - | |
| Trre14g00113 | 919 | Gene3D | - | 591 | 680 | IPR011989 | - | |
| Trre14g00113 | 919 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 555 | 586 | IPR000225 | GO:0005515 | |
| Trre14g00113 | 919 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 511 | 556 | IPR000225 | GO:0005515 | |
| Trre14g00113 | 919 | SMART | LRR_CC_2 | 177 | 202 | IPR006553 | - | |
| Trre14g00113 | 919 | SMART | LRR_CC_2 | 149 | 176 | IPR006553 | - |
Showing 1 to 10 of 37 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre14g00113 | - | - | ccaj:109792060 | 1516.9 |
Showing 1 to 1 of 1 entries