Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00101 ATGACTTTTATCTTACACTCTCATAATCTCCTTTTGCTCCTTCCTCTTTGCTTTGCTTCATTTACTATGGGATTGGGAGCCACTCTACAACAAGATGAAGTAAAAGCTCTGAAAGACATAGGTAAAACACTTGGAAAGAAGGATTGGGATTTCAGCGTTGATCCATGTAGTAATAACTGGATACAAGGTTCTGAAAATGCTGTTACCTGCAATTGCTCTTATCAAAATAATACTCTCTGCCATGTTCTTAGCGTTGTTCTAAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTACAAGAAATTGACCTAACCCTCAACTATCTTAATGGTACAATTCCAAAACAATGGGCCACATTAAATCTTGTAAACATCTCCTTCTATGGAAATCGTCTATCCGGTCCAATTCCAAAGGAGTTTGGAAAAATCACCACTCTCAAAACCTTGGTATTGGAGTTCAACCAATTGTCTGGAAATCTTCCTCCAGAACTTGGGAGTCTTTCCCAGATTGAAAGATTACTTCTTTCCTCTAACAATTTCACTGGAGTGTTACCTGCAACATTTGCTAACCTCACTGCACTGAAGCAATTTCGAATTGGTGACAGTCAATTATCTGGAACAATACCCAACTTTATACAGAACTGGATACATCTTGAGATGCTCGTGATCCGAGGGAGTGGTTTGAGTGGGCCAATTCCTGCTGGAATTTCACTTTTGAAAAACCTCACTGACTTGACTATTACTGATTTGAATGGATCTGATTCACCTTTTCCACATCTTGAAAACATGTCAAGGTTGTCAAAATTGGAATTGAGAAGTTGCAATATCATTGGAGCATTGCCTGATTATCTTGGAAAGTTAATTAATCTTGAAGTTATAGAACTCAGCAACAACAACTTAAGTGGACAAATCCCTGCGAGCTTCAATGATCTAAAGAACATGTATTTGCTATTTTTATCCGGCAATCAGTTATCTGGACCGCTGCCTGATTGGATATATAAACCAGATTTTGTAGATCTGTCATATAACAACTTCACTATAACAAAATTTGAGCAGCAAACTTGTCAACAAGGAAGTGTGAACTTGTTTGCATCTTCTTTGAAGGGAAACAGTTTAGGAAATATTTCATGTTTGGAAAACTATCATTGTCCTAAAACTTGGTACTCTCTCAATATAAATTGTGGTGGAAAGAGCATAACATTTGATGGAAATAAGACATACGATGATGATTCAAGTGAGATGGAACCGTCAAGGTATGGTCAATTTGGAACGAACTGGGCACTAATAACTTCTGGTCACTTCTTTGATAGTGGGCGCCCTGACTACTATAAATGGTCTAATACAACAAAGCTTGCTGTGGACAATGATGCTCAACTTTACATGGATGCACGCGTTTCTCCAAATGCTCTAACTTATTATGGATTCTGCCTTGGAAACGGAAACTACACCGTCAATCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATTTAGTAGCATTGGAAGACGTGTATTTGACATCTACATCCAGAGAAAGTTGGTGGTGAAGGATTTCGATATTGTAAAAGAGGCAGGTGGCGTTGGTAAGGAAGTTATTAAAAATTTTACTGCTGGTGTGACTAGTAATGCGTTGGAGATTCGGTTATATTGGGCTGGGAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTTGATCCCGATTTTACACCCCCATCGGAAAATAGTAGAAGCATATCGGCAGGGGTTGTGGTTGCAATTGTGGCTGCAGGAGCGATTGTTATCATCTTCATAATTGGCATTATGTGGTGGAAGGGTTGTTTAAGATTGAAATGTTTAGGATCAAGAGAGAAAAAGGCTTCACAAAGTGGCTTATTCACTTTACGACAAATCAAATCAGCAACAAACAACTTCGATGAATCTTTCAAGATTGGAGAAGGAGGATTTGGTCCAGTTTACAAGGGTGTTCTATCAGATGGCGCAATAGTAGCAATTAAGCAGCTATCTTCTAAATCAAAACAAGGATCTCGTGAATTTATTAATGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTCGTTAAGCTGTATGGTTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATATATGGAGAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAAGAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACTAGGAAGAGCATTTGTATTGGCATTGCTAAAGGTTTAGCTTATCTTCACGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACCAATGTGTTGCTAGATAAAGATCTCAACCCCAAGATATCGGATTTTGGTTTGGCAAAGCTCAATGAAGACGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGCTATTTGACGGACAAAGTAGATGTTTATAGTTTTGGAATTGTTATGTTGGAAATTGTTAGTGGAACCAACAACACTGTTAGCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTCTTGAAGGAAAAAGATGATCTAATGGAACTCGTTGATCGGAAATTAGGTCAAGATTTCAAGAAAGAGGAGATAAGAATGATGATAAACGTGGCTCTTTTATGCACTAGTTTTTCGCCGTCGCTTAGGCCCTCCATGTCTTCGGTAGTAAGCATGCTTGAAGGAAGAACAAATGTTCAAGAAGTGGTGGCAGAATCAACTGAGGTATTGGATGATAAGAAAAACAAGGTGATGCAACAATATTACAAACAAATAGGAGAAAATAGCACAAGTGATGCTCAAAGCATCCAAACAGATGAATCTCATACCTTCATATATGATACAGATAATTCTATCTTGGAATCCAAAAATTAG 2985 0.3829 MTFILHSHNLLLLLPLCFASFTMGLGATLQQDEVKALKDIGKTLGKKDWDFSVDPCSNNWIQGSENAVTCNCSYQNNTLCHVLSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKQWATLNLVNISFYGNRLSGPIPKEFGKITTLKTLVLEFNQLSGNLPPELGSLSQIERLLLSSNNFTGVLPATFANLTALKQFRIGDSQLSGTIPNFIQNWIHLEMLVIRGSGLSGPIPAGISLLKNLTDLTITDLNGSDSPFPHLENMSRLSKLELRSCNIIGALPDYLGKLINLEVIELSNNNLSGQIPASFNDLKNMYLLFLSGNQLSGPLPDWIYKPDFVDLSYNNFTITKFEQQTCQQGSVNLFASSLKGNSLGNISCLENYHCPKTWYSLNINCGGKSITFDGNKTYDDDSSEMEPSRYGQFGTNWALITSGHFFDSGRPDYYKWSNTTKLAVDNDAQLYMDARVSPNALTYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVVKDFDIVKEAGGVGKEVIKNFTAGVTSNALEIRLYWAGKGTTTIPFGSVYGPLISAISVDPDFTPPSENSRSISAGVVVAIVAAGAIVIIFIIGIMWWKGCLRLKCLGSREKKASQSGLFTLRQIKSATNNFDESFKIGEGGFGPVYKGVLSDGAIVAIKQLSSKSKQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQLRLDWKTRKSICIGIAKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTDKVDVYSFGIVMLEIVSGTNNTVSHPQEECFSLLDWVHLLKEKDDLMELVDRKLGQDFKKEEIRMMINVALLCTSFSPSLRPSMSSVVSMLEGRTNVQEVVAESTEVLDDKKNKVMQQYYKQIGENSTSDAQSIQTDESHTFIYDTDNSILESKN 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00101 994 SMART serkin_6 655 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00101 994 FunFam Putative LRR receptor-like serine/threonine-protein kinase 731 942 - -
Trre14g00101 994 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 965 - -
Trre14g00101 994 Gene3D - 394 584 - -
Trre14g00101 994 Pfam Protein kinase domain 658 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00101 994 CDD STKc_IRAK 661 932 - -
Trre14g00101 994 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 730 - -
Trre14g00101 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 394 585 - -
Trre14g00101 994 SUPERFAMILY Protein kinase-like (PK-like) 639 931 IPR011009 -
Trre14g00101 994 Gene3D Ribonuclease Inhibitor 222 368 IPR032675 -
Trre14g00101 994 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 265 355 - -
Trre14g00101 994 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Trre14g00101 994 Gene3D Phosphorylase Kinase; domain 1 627 730 - -
Trre14g00101 994 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 30 258 - -
Trre14g00101 994 Pfam Malectin domain 396 580 IPR021720 -
Trre14g00101 994 SUPERFAMILY L domain-like 76 353 - -
Trre14g00101 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Trre14g00101 994 Gene3D Ribonuclease Inhibitor 151 221 IPR032675 -
Trre14g00101 994 Gene3D Ribonuclease Inhibitor 33 150 IPR032675 -
Trre14g00101 994 ProSiteProfiles Protein kinase domain profile. 655 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre14g00101 994 Gene3D Transferase(Phosphotransferase) domain 1 731 958 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00101 Trre-Chr14 822801 830530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00101 27 980 Receptor kinase-like Gene Family AT1G53420 52.008 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre14g00101 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00101 - - gmx:100798947 1298.88