Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00095 ATGTCAACTGAAAATTTATTAGTATTTAATGGAGGTGAGAATCGAGTCCTAGACCACTTTTATAACTTCACTTCTCGAGCTCGAGAACATAGGCCGCCGGCCAACAAAGTAGTAGATGTGTTTAGCGTTGGAGATATCGTTTTGGCAATTCTTGTTTCCGTCGCAATCCATTATTGGAGGCTCAACAGAAACACACCCATGACAAAGTGGCCTGTGCTTGGAATGCTACCTGCTTTCGTACACAACTTATCCAACATTAACAACTATTTAACTTTAACTTTGAAACAAAATGGAGGAACATTCTATTTTGAAGGACCATGGTTAGCAAATTTGGACACTGTTTTCACCAGTGATCCGAGGAACGTGCAACACATCACAAGCACAAAATTTGCAAACTATGCAAAAGGAGATAATTTCAGAGAGATTTTTGACATTCTTGGAGATGGAATTTTCAGGTCTGAGTCCCACCTATGGAAGTACAGTAGGACTCTACTTCATTCAATTTTCAAACAAGAAAGTTTTCGTGCATTTATTCAAAAAACAGTTGAGGAAAAAGTTTGTAATGGTCTTTTTGTGTTTCTTGACAATGCTTGTAAAGAAGGTGTGCAAGTTGATTTACAAGATGTTTTTCAAAGGTTAACTTTTGACAACATATGTTCTGTAGTTTTAGGATATGATCCTAATTGTCTTTCTATTGATCTCCCTATAATTATATGTGAGAGAGCCTTTACACACTCAGAGAACACATTGTTCTATAGACATGTAAAGCCAAAATTCTTGTGGAAGTTGCAAAATTGGTTTCAAGTTGGTCAAGAGAAAGAATTTATAGAGAATAATAAAATTCTTGATAAAATGTTGTATTCAGAAATCAAATCTAGAAGAGAAATGCAAGGACAAAAAAATTTTAACTTGCTAAATATTATTATGAATGAAGTAGGAGATGAAAAAAATCCAATATATGATAAGCTTTTGATAGATGATAAGTTTTTGAGAGATACATCAATTAATCTACTTGCAGCTGGAAGAGACACTATTAGTTCTTGCCTTAGTTGGTTTTTTTGGTTAGTGGCAACACACCCTTTGGTTGAAGCTAAGATTCTTGAAGAGATCAAAGAAAATTTACCATCAAGAGAACATAATTGGAAAGATTTAGGGACAAAAGGGCTTAGCAAGTTAGTTTATCTACATGGAGCTTTATGTGAAACCTTAAGGCTTTATCCACCAATTCCTCTTGAGCATAAATGTGCATCGGAACCGGATGTGCTTCCTAGCGGACATAGGATTAAGTCCAATGCAACGATAGTGTATTCTCTATACGCAATTGGAAGGGTCGAGGAAATATGGGGAAAAGATTGCTTGGAGTTTAAGCCAGAGAGATGGATTTCGCCGAAAGGAGGAGTAGTTCATGTACCGTCTTACAAGTTCATTGCTTTTAATGCTGGACCAAGGAGTTGTTTGGGAAAGGATATAAGCTTCATTGAGTTGAAAATTGTTGCTGCAGCTATATTGTCAAATTATCACATTCAAGTAGTGAAAGATCATCCAATAATCCCAAGTGTTTCTGTTGTCCTACACATGAAACATGGCTTGATGGTTAATGTCAAAAAAAGAAGTATTTGA 1620 0.358 MSTENLLVFNGGENRVLDHFYNFTSRAREHRPPANKVVDVFSVGDIVLAILVSVAIHYWRLNRNTPMTKWPVLGMLPAFVHNLSNINNYLTLTLKQNGGTFYFEGPWLANLDTVFTSDPRNVQHITSTKFANYAKGDNFREIFDILGDGIFRSESHLWKYSRTLLHSIFKQESFRAFIQKTVEEKVCNGLFVFLDNACKEGVQVDLQDVFQRLTFDNICSVVLGYDPNCLSIDLPIIICERAFTHSENTLFYRHVKPKFLWKLQNWFQVGQEKEFIENNKILDKMLYSEIKSRREMQGQKNFNLLNIIMNEVGDEKNPIYDKLLIDDKFLRDTSINLLAAGRDTISSCLSWFFWLVATHPLVEAKILEEIKENLPSREHNWKDLGTKGLSKLVYLHGALCETLRLYPPIPLEHKCASEPDVLPSGHRIKSNATIVYSLYAIGRVEEIWGKDCLEFKPERWISPKGGVVHVPSYKFIAFNAGPRSCLGKDISFIELKIVAAAILSNYHIQVVKDHPIIPSVSVVLHMKHGLMVNVKKRSI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00095 539 CDD CYP86A 101 530 - -
Trre14g00095 539 PRINTS P450 superfamily signature 476 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS P450 superfamily signature 485 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 Gene3D Cytochrome P450 50 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 Pfam Cytochrome P450 68 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PANTHER CYTOCHROME P450 59 531 - -
Trre14g00095 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Trre14g00095 539 SUPERFAMILY Cytochrome P450 57 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS E-class P450 group I signature 485 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre14g00095 539 PRINTS E-class P450 group I signature 475 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00095 Trre-Chr14 789218 792320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00095 67 538 Cytochrome P450 AT2G23180 44.906 1.13e-151 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00095 - - tpra:123890719 977.622