Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00024 ATGGATATTAATATTGGCAAGAGCAAGAGCTGCATGAAGAAGAAGTCATCAGGCCTCATCACAAAAACATGGGAGAGATGCAAGTCCATAGGAAGAGGCGGAGGAGGGCACAAAACTAGTAAATATTATCCATCATCACCCATGATGATGACGACTCCAAGGAGCAAATCATGGCCTAGTAGTCTACGAGGAGGAAAGAAAGGCGGTGTTGTGGCTCCGGAAGGATGCTTTTCGGTTTATGTTGGGCCTCAAATGCAAAGGTTTGTGATCAAAACTGAGTATGCCAACCATCCTTTGTTCAAGATGTTGCTTGAAGAAGCTGAATCAGAATATGGTTATAGCTGCCAACGACCTTTGGCCCTTCCTTGTAATGTTGATGTCTTTTATAAGAAACCGTTCTCGTTCTTCTTATCATCTATCAGTCCTTCCAGAATGATTGTCTTAAACAACTTCTTCTGA 459 0.4248 MDINIGKSKSCMKKKSSGLITKTWERCKSIGRGGGGHKTSKYYPSSPMMMTTPRSKSWPSSLRGGKKGGVVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSCQRPLALPCNVDVFYKKPFSFFLSSISPSRMIVLNNFF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00024 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 53 130 IPR003676 GO:0009733
Trre14g00024 152 Pfam Auxin responsive protein 65 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00024 Trre-Chr14 245969 246492 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00024 72 128 Calmodulin-binding Proteins AT3G43120 49.123 1.01e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00024 K14488 - gmx:100777217 158.303