Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre14g00015 ATGGATACTAATATTGACAAGAGCATGAAGCAGGGGAACAAGAAGTCAGGCCTGATCACAAAAACATGGGAGAGATGCAAGTCCATAGGAAGAGGAGGGCACAAAAGTAAGTATCCATCATCGGTGACTCCAACGACAAGAAGGAGCAAATCATGGCCCAATTTGCGAGGCGGAAAGAAAGGCGGTGTTGTGGCTCCGGTGGGATGCTTTTCGGTTTACGTTGGGCCTCAAATGCAAAGGTTTGTGATCAAAACTGAGTATGCTAACCATCCTTTGTTCAAGATGTTGCTTGAAGAAGCTGAATCAGAATATGGTTATAGCTGCCAAGGACCTTTGGCCCTTCCTTGTAATGTTGATGTCTTTTACAAGGTGTTGATGGAAATGGACAGTGAAGCTCCTCCTCCTCGTGGTTGTGCTTTCGTAAACCGCTCTCGCTCTTCTTATCATCTTCTTAGCCCTTCCAGAGTGATTCTCATAAACAACTTATGA 489 0.4499 MDTNIDKSMKQGNKKSGLITKTWERCKSIGRGGHKSKYPSSVTPTTRRSKSWPNLRGGKKGGVVAPVGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVDVFYKVLMEMDSEAPPPRGCAFVNRSRSSYHLLSPSRVILINNL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre14g00015 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 125 IPR003676 GO:0009733
Trre14g00015 162 MobiDBLite consensus disorder prediction 29 56 - -
Trre14g00015 162 MobiDBLite consensus disorder prediction 38 52 - -
Trre14g00015 162 Pfam Auxin responsive protein 51 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre14g00015 Trre-Chr14 173414 173902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre14g00015 65 125 Calmodulin-binding Proteins AT3G43120 49.180 4.04e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre14g00015 K14488 - gmx:100777217 193.356