Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05414 ATGGATACACCCGTTAATCACTATCTACTATGCTCCTTAATAATAATCCTTCACCTTGTTTCTTCTACATTGGGTGATCAAAACTCCAACAATTATATCATTCACATGAATTTATCAGCCATGCCCAAACCCTTCTCAAGCCAACAAAGTTGGTACTTAGCCACCCTTTCCTCACTACTTGACATTACTACTTCTAATAATCAAGTAACAATAAACACCAACCAGTTGAACTACATTTCTTCTTCAAAAAAACTTACATATACCTACACTAATGTCATGAATGGTTTTAGTGCAAGTTTGTCTCCTTTGGAGCTTGAGGCTCTAAAAACCATGGCCGGATATATTTCATCCATAAAGGATTTGCCTATCAAACCAGACACAACACACTCTCCTCAATTCATTGGCCTCAATCCTGTTTCAGGAACATGGCCTAGAACACAATACGGTAAAAATGTTATAATTGGTATGATAGACAGTGGAATTTGGCCAGAAAGTGAAAGCTTTAAAGATGATGACATGCCTAACATTCCTTCACGATGGAAAGGCCAATGTCAAAATGGTACTCAATTTGACTCTTCATTGTGCAACAAAAAACTCATAGGAGCTCGATTCTTCAACAAAGGAGTGCTAGCAAATAATCCTAATATCAAAATAACCATGAACTCCACACGCGACATAGACGGTCATGGCACTCACACATCAACCACTGCTGCTGGAAGAAAAGTTGAAGGTGCATCCTACTTTGGATATGCCTCCGGATCAGCCATAGGCATTGCTCCACATGCTCATGTATCCATGTACAAGGTATTGTGGAAAGAAGGGGCATATGTATCTGATACAATAGCTGCAATTGATAGTGCAATAGAAGATGGTGTAGATGTTCTTTCATTATCATTGGGTTTTGATGAGGCACCTTTGTATGAAGACCCTATAGCTATAGCCACATTTGCAGCTATGGAGAAAAACATTTTTGTATCAACATCTGCAGGGAATAGAGGGCCAGTGCTTGAAACTCTGCACAATGGAACACCATGGGTAATAACTGTGGCTGCTGGCACATTGGACCGTGAATTTCATGGCGATTTAACACTTGATAATGGGTCCATAGTCACTGGTTTGTCTCTCTATCCAGCGAATTTTTCTTCAGAAAAGGTTCCAATGGTTTTCATGAGCTCGTGCGATAATTTGACGGAACTCATCAAAGCGAGAAACAAGATCGTGGTGTGTGAAGACAAGAATAGAACACTTGGTACTCAAGTAAATAACTTGGACAGAGCAAAAGTTGTTGGAGGTGTTTTCATATCAAATAGTAACGATGATATTACGTATTACATTCAAACTAAGTTTCCATCCATTTTTTTGAATCCAATGAATGGAGAACTAGTCAAGGATTACATCAAATGCAACTATCGTAATCCAAAAGCAAGCATGACATTTAAGAAAACTATTTTAGGTACAAAACCAGCACCAATTGTGGATAGTTATAGTTCTAGAGGACCATCACATAGTTGTCCATTTGTGTTAAAACCAGACATCACAGCACCAGGAACATTAATCTTAGCTTCATGGCCTCAAAATGTTCCAGCAACAGAATTGCAATTCCAAAACAATCTCTTCAGCAACTTCAACTTGTTAAGTGGAACATCAATGTCATGTCCACACATTGCTGGTGTAGCAGCACTTTTAAAAGAAGCACATCCTAGTTGGAGCCCTGCAGCCATTAGATCATCAATCATGACAACTTCGGACATGTTAGACAACACAAAGGAACTCATCAAAGACATTGGTAATGATTACAAACCAGCTTCACCTCTAGCATTGGGAGCTGGCCATGTTAACCCCAATAGAGCACTTGATCCCGGACTTGTTTATGATGCAGGAAAACAAGACTATGTGAATCTTCTATGTGCATTAAATTTCACTCAAAAGAACATCATGGCTATCACAAGATCCTCTTCTAACAATTGCTCTAAACCTTCTCTTGATCTTAATTATCCATCTTTTATTGCCTTTTTCAATACTGAGTCAAATTTATTTACACAAGAATTTCAAAGAGTAGTAACCAATGTTGGGGAGGAATCAACTATCTATGTAGCTAACATTACACCAATTGAAGGGTTCCACGTTAGTGTTATCCCTAACAAGTTGGTGTTTAAGGAGAAAAATGAAAAGGTGACATACAAGTTGAGGATAGAAGGTTCCAAAATGGAGAAAAATAAAGTAGCTTTTGGGTATCTTACATGGACAGACACAAAACACATTGTTAGAAGTCCCATTGTTGTGACAAGTCTCAGCTCAGAACTAACACCCCCGTAG 2316 0.386 MDTPVNHYLLCSLIIILHLVSSTLGDQNSNNYIIHMNLSAMPKPFSSQQSWYLATLSSLLDITTSNNQVTINTNQLNYISSSKKLTYTYTNVMNGFSASLSPLELEALKTMAGYISSIKDLPIKPDTTHSPQFIGLNPVSGTWPRTQYGKNVIIGMIDSGIWPESESFKDDDMPNIPSRWKGQCQNGTQFDSSLCNKKLIGARFFNKGVLANNPNIKITMNSTRDIDGHGTHTSTTAAGRKVEGASYFGYASGSAIGIAPHAHVSMYKVLWKEGAYVSDTIAAIDSAIEDGVDVLSLSLGFDEAPLYEDPIAIATFAAMEKNIFVSTSAGNRGPVLETLHNGTPWVITVAAGTLDREFHGDLTLDNGSIVTGLSLYPANFSSEKVPMVFMSSCDNLTELIKARNKIVVCEDKNRTLGTQVNNLDRAKVVGGVFISNSNDDITYYIQTKFPSIFLNPMNGELVKDYIKCNYRNPKASMTFKKTILGTKPAPIVDSYSSRGPSHSCPFVLKPDITAPGTLILASWPQNVPATELQFQNNLFSNFNLLSGTSMSCPHIAGVAALLKEAHPSWSPAAIRSSIMTTSDMLDNTKELIKDIGNDYKPASPLALGAGHVNPNRALDPGLVYDAGKQDYVNLLCALNFTQKNIMAITRSSSNNCSKPSLDLNYPSFIAFFNTESNLFTQEFQRVVTNVGEESTIYVANITPIEGFHVSVIPNKLVFKEKNEKVTYKLRIEGSKMEKNKVAFGYLTWTDTKHIVRSPIVVTSLSSELTPP 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05414 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 124 IPR037045 -
Trre13g05414 771 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Trre13g05414 771 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Trre13g05414 771 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Trre13g05414 771 CDD Peptidases_S8_3 124 583 IPR034197 -
Trre13g05414 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 761 IPR045051 -
Trre13g05414 771 Pfam Peptidase inhibitor I9 32 121 IPR010259 -
Trre13g05414 771 Gene3D - 635 765 - -
Trre13g05414 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Trre13g05414 771 SUPERFAMILY Subtilisin-like 126 622 IPR036852 GO:0004252|GO:0006508
Trre13g05414 771 Gene3D Peptidase S8/S53 domain 151 631 IPR036852 GO:0004252|GO:0006508
Trre13g05414 771 ProSiteProfiles Serine proteases, subtilase domain profile. 133 618 - -
Trre13g05414 771 FunFam Subtilisin-like protease SBT1.5 151 363 - -
Trre13g05414 771 FunFam Subtilisin-like protease SBT1.9 20 126 - -
Trre13g05414 771 Pfam Fibronectin type-III domain 662 761 IPR041469 -
Trre13g05414 771 Gene3D - 355 484 - -
Trre13g05414 771 Pfam Subtilase family 149 588 IPR000209 GO:0006508|GO:0008236
Trre13g05414 771 CDD PA_subtilisin_like 361 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05414 Trre-Chr13 58751757 58754409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05414 32 767 Subtilisin-like Serine Gene Family AT5G67090 45.828 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05414 - - psat:127132069 1330.85