Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05398 ATGTTAGGAAGAAGCTATAGACAAGTTCAGCAGCAGCACCACCACCATGGAAGAACAAAAGATATACCAAAAGGGTGTGTTGCAATAAAGGTGGGTCATGGTGAAGACCAACAAAGATTTATTGTACCACTGAATTACCTCAATCATCCACTCTTTGTTCGGCTTCTGAAGGAGGCAGAGGAAGAGTATGGTTTTTCTCAGCAGGGTACTATAATCATCCCTTGTCAATTGGAGGAGTTTAAGGATATTCTTCAACACATGATTCATATTGATGATATTAATAATAAGTCCATCCAACACCAACATCACCACCTCGTTGGCTGCTTCAGAGCTTGA 336 0.4077 MLGRSYRQVQQQHHHHGRTKDIPKGCVAIKVGHGEDQQRFIVPLNYLNHPLFVRLLKEAEEEYGFSQQGTIIIPCQLEEFKDILQHMIHIDDINNKSIQHQHHHLVGCFRA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05398 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 83 IPR003676 GO:0009733
Trre13g05398 111 MobiDBLite consensus disorder prediction 1 20 - -
Trre13g05398 111 Pfam Auxin responsive protein 14 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05398 Trre-Chr13 58662948 58663283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05398 21 101 Calmodulin-binding Proteins AT5G20810 44.828 2.47e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05398 K14488 - mnt:21406213 130.568