Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05392 ATGGATACTTTCTCAACCTCTGTTTCAACCCTCAAAATCTCATCACTTCCACCACCACCATCATCAACAAATCACTTCACAAGAACAACCCCTCATGTCATCTCTCCACGACCCATACCCCATTTCTCTTCCACTTCCAAACCCAACAGCAGCATAGCCACACAAAAAAACAAACCTTTCTCCCACAATAATAATAATAATAACACTTCTCCTTCTCTACCATTCTCTTCCTCAAACACCCGCAAACCATCTTCTCCAATATTCCATCACACTCCTGCTACTGGCTATGCTGCTGCAATCATAGATGTAGCTCAAAAAACCAATACCCTTCACCCAGTTCAAAGGGATGTTCATAGACTCTTGAAATTCCTCAAAATATTGAAATTTCAATCAGATGCTGGTGTTGACCCTTCAGCGATAAGGAGGGTAGTTGAACAGGGAAATTTTCAAAGGCACGTGGTTGTTTTGGTGAAGATGTTGATGAAGAAGAACAAGTTGGAAATTGTTGAACAAGTGTTGGAAGAGTTCGTGAGGATTTATGATGAGCTGTGTGGAACTACTCAAGTTGTGTTGGTTTCATCAAAAAGAGAGATTGGGAAAGATGAAATGTTTGGGATTGCAAAAAGTGTGCACAAACTCAACGGAGCAGTGAGGGTTAGGGTTAGGAATTTAGTTCAACAGAGTTTTCCTTCTTTTGCAATGTAA 705 0.4057 MDTFSTSVSTLKISSLPPPPSSTNHFTRTTPHVISPRPIPHFSSTSKPNSSIATQKNKPFSHNNNNNNTSPSLPFSSSNTRKPSSPIFHHTPATGYAAAIIDVAQKTNTLHPVQRDVHRLLKFLKILKFQSDAGVDPSAIRRVVEQGNFQRHVVVLVKMLMKKNKLEIVEQVLEEFVRIYDELCGTTQVVLVSSKREIGKDEMFGIAKSVHKLNGAVRVRVRNLVQQSFPSFAM 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05392 234 Gene3D - 89 183 IPR026015 -
Trre13g05392 234 MobiDBLite consensus disorder prediction 1 31 - -
Trre13g05392 234 MobiDBLite consensus disorder prediction 39 87 - -
Trre13g05392 234 PANTHER ATP SYNTHASE DELTA CHAIN 75 229 IPR000711 GO:0015986|GO:0046933
Trre13g05392 234 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 93 183 IPR026015 -
Trre13g05392 234 MobiDBLite consensus disorder prediction 1 89 - -
Trre13g05392 234 Pfam ATP synthase delta (OSCP) subunit 94 228 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05392 Trre-Chr13 58643829 58644533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05392 72 229 Primary Pumps ATPases AT4G09650 26.061 1.66e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05392 K02113 - gmx:100526851 213.001