Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05359 ATGATCCCTATAGGGCGTGGCCAGCGAGAATTGATTATTGGGAACATACAAACAGGTAAAACTGCAGTAGCCACATATACGATTCTCAATCAACAGGGACAAAATGTAGTATGTGTTTATGTAGCTATCGGTCAAAAAGCCTCTTTTGTGGCTCAAGTGGTAACTACTTTACAAGAAGGAGGAGCAATGAAATACACTATTATAGTGGCTGAAACGACAAATTCTCCGGCTACATTACAATACCTCGCGCCTTATACAGGAGCAACTCTGGCTGAATGTTTTATGTACCGTGAACGTCACACTTTAATCATTTCTGATGATCTCTCCAAACAATCACATGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACAGCGTCGCGAAGCTTATCCCGAAGATGTTTTTTATTTACATTCTCGTCTTTTGAAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGAGTGACTTAAGACCCAATCGGGAGATGTTTTAG 528 0.4034 MIPIGRGQRELIIGNIQTGKTAVATYTILNQQGQNVVCVYVAIGQKASFVAQVVTTLQEGGAMKYTIIVAETTNSPATLQYLAPYTGATLAECFMYRERHTLIISDDLSKQSHAYRQMSLLLRRPQRREAYPEDVFYLHSRLLKRAAKLSSQLGEGSMTALPIVESDLRPNREMF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05359 175 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 166 IPR005294 GO:0015986|GO:0045261|GO:0046933
Trre13g05359 175 FunFam ATP synthase subunit alpha, mitochondrial 1 169 - -
Trre13g05359 175 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 166 IPR000194 GO:0005524
Trre13g05359 175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 166 IPR027417 -
Trre13g05359 175 Gene3D - 1 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05359 12 159 Primary Pumps ATPases(2) AT1G78900 29.878 5.71e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05359 K02111 - sly:3950425 278.87