Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g05283 | ATGGAACACAGTGACAACCAGTTAAGCTCTTACTTCCACCACCACAACCACAACCACAACCACCACCAACAACAACAACCACAAGGAAATTCCACCACCGTATCCACCACCACTACCACCACCGCAATTCCGACCAATGGACTTTTATCGAACACAGATGGGTCCCACATACTGTATCCTCATTCAGTGGCTTCTGCTGTATCGTCTCAGCTTGAACCAGCTAAGAGAAAGAGAGGAAGACCTAGAAAATATGGAACACCTGAACAAGCTCTAGCTGCTAAAAAAGCTTCTACGTCGTCGTTTTCACCTACTCCACCTTCTGACAACAACAATAGCAACAAGAACACCACTCACTCTTTCTCTCCCTCTCCTTCTTTCTCTTCCAAGAAATCTCATTCTCTCTCTCTAGGCAATGCAGGACAAGGTTTCAGTGCACATGTCATTGCTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGCAATTTATGCAACAAAACAGGGGTGAGGTATGCATTCTATCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGTCAACCAGCATCTTCAGGAGGCAACATTACATATGAGGGTCGGTTTGATATTATTTCGCTTACCGGTTCCTATGTCCGTAATGAAACCGGAGTGCGAAGTGGTGGTCTCAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCCGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTATCGACAACAAGAAGGATACTAGTGCTGGTGGAAAAGGTGATGCCTCTACCGGTAAGTTGCCATCACCAGTTGGTGAATCAGCATCAAATTTAGGTTACCGCCAAACAGTTGACAGTTCCAGTGGGAATCCAATGCGGGGAAATGAAGAACATCAAGCTATGGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTACATGTGACACCTCCCAGGTCCACAGACTGGGGGAGTCATCCTGATTCAAGACATGCTAGTTATGACCTTTCAGGAAGAACAGGCCATGGGTCACACCAGTCTCCTGAGAATGGAGGCTATGACCAAATTCCTGATTGA | 1104 | 0.4611 | MEHSDNQLSSYFHHHNHNHNHHQQQQPQGNSTTVSTTTTTTAIPTNGLLSNTDGSHILYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPTPPSDNNNSNKNTTHSFSPSPSFSSKKSHSLSLGNAGQGFSAHVIAVAAGEDVGQKIMQFMQQNRGEVCILSASGSISNASLRQPASSGGNITYEGRFDIISLTGSYVRNETGVRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFIDNKKDTSAGGKGDASTGKLPSPVGESASNLGYRQTVDSSSGNPMRGNEEHQAMGGSHFMIQQLGLHVTPPRSTDWGSHPDSRHASYDLSGRTGHGSHQSPENGGYDQIPD | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g05283 | 367 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 142 | 255 | - | - | |
Trre13g05283 | 367 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 145 | 255 | IPR005175 | - | |
Trre13g05283 | 367 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 18 | 301 | IPR039605 | GO:0003680 | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 22 | 48 | - | - | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 92 | 134 | - | - | |
Trre13g05283 | 367 | CDD | DUF296 | 146 | 255 | IPR005175 | - | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 66 | 134 | - | - | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 324 | 367 | - | - | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 278 | 303 | - | - | |
Trre13g05283 | 367 | ProSiteProfiles | PPC domain profile profile. | 139 | 281 | IPR005175 | - | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Trre13g05283 | 367 | MobiDBLite | consensus disorder prediction | 262 | 307 | - | - | |
Trre13g05283 | 367 | Gene3D | - | 144 | 269 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g05283 | Trre-Chr13 | 57909424 | 57912782 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre13g05283 | 32 | 367 | AT-hook Motif Nuclear Localized (AHL) Family | AT3G04590 | 50.407 | 1.70e-88 | 271 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre13g05283 | - | - | gmx:100809675 | 485.723 |