Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05276 ATGAACTACCTCCCTCCACATCCAAACATCCTTAAAATCTTTGACTCATTTGAAGATGTAGATTTCTCATACATGGTACTCGAACTCTGCCAAACCAATGACCTTCTCGAAGTCATAAGTAAAGGCATATTATCGGAGCCACAAGCTGCATGTATCGTTAAGAAGCTTCTAGAAGCGATAGAGCATTGTCATAAAAACGGAGTGGCACATAGAGACATAAAACCGGAGAATGTTTTGTTTGATTTTGATGGAAATGTCAAACTCGCTGATTTTGGTTGTTCAGAATGTTTTTTTAAGGATGGAAGAAAGAAAAATATGACTGAACATGTGGGAACACCTTTTTACGTGCCACCTGAAGTGATCTTGAGAAAACATTGTTATAATGAGAAAGTTGATATTTGGAGTTGTGGTGTTACTTTTTATGCTATGTTGAGTGGGATAATACCCTTTGTTGGAGAAACTAATGATAAGATTTTTGAGAGTATCTTGAAGACAGATTATTTGAGGTTTCCAAAGGAACATTTCGAATCTGTGTCGTCGTCTGTTAAAGGTCTTATTAGGAGGATGGTTTGTTGGGATCCCTCGAGACGAATATCGGCTAAGCAAGCCTTGATGCATCCGTGGATCGTGAAAGGAGGTGTGATTAAAGATGATGATGATGTTATTGATGTGTTTGGTTCGACATTGACAAACCGCATCCGTCCGCCCAACAAGCTTTCCATCTTGAGAGCAAGAAGCTACAAAGGGTAG 750 0.392 MNYLPPHPNILKIFDSFEDVDFSYMVLELCQTNDLLEVISKGILSEPQAACIVKKLLEAIEHCHKNGVAHRDIKPENVLFDFDGNVKLADFGCSECFFKDGRKKNMTEHVGTPFYVPPEVILRKHCYNEKVDIWSCGVTFYAMLSGIIPFVGETNDKIFESILKTDYLRFPKEHFESVSSSVKGLIRRMVCWDPSRRISAKQALMHPWIVKGGVIKDDDDVIDVFGSTLTNRIRPPNKLSILRARSYKG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05276 249 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 216 - -
Trre13g05276 249 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Trre13g05276 249 SUPERFAMILY Protein kinase-like (PK-like) 6 211 IPR011009 -
Trre13g05276 249 Gene3D Transferase(Phosphotransferase) domain 1 1 238 - -
Trre13g05276 249 FunFam Maternal embryonic leucine zipper kinase 3 218 - -
Trre13g05276 249 SMART serkin_6 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g05276 249 Pfam Protein kinase domain 7 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g05276 249 ProSiteProfiles Protein kinase domain profile. 1 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05276 Trre-Chr13 57868354 57869550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05276 1 210 EF-hand Containing Proteins AT4G09570 42.991 1.24e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre13g05276 Pkinase 4.1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05276 - K08794 mtr:11423185 256.914