Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05177 ATGACTTCATCACCAATGTTAAAATTCAGAGTGCAAAGGTGCCAACCAGAGTTGGTGCCACCAGCTGCACCCACTCCTCATGAAATAAAACTACTATCTGACATAGATAATCAAGAATGTTTGCGTTTTAATATTCCTAATATATTTATCTATCCTCATCAACCATCAATGACAAAGAAAGATCCTATTAAAGTTCTTAAACATGCACTCTCACAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGGGAGGGAGCTGGGGGCAAGTTGATGGTTGATTGTACTGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTTTGCACCCTCCATTCCCTTGGTTCCAACAACTCTTAGATGATGTTCATGGAACCCAACAAATTATTGATCATCCCATTTTACTCATACAGGTGACTCGTCTCAAGTGCGGTGGTTTCATATTGTCCATATATTGTAACCATGCAATTGTAGATGCAACTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATGGCTCGGGGAGCACATCAACCTTCCATTCAACCTATTTGGCAAAGAGAGTTCCTAATGGCAAGAAACCCACCACGTGTTACATGCAACCATCGTGAATACGAACAAATTATACTTCCTCCAAATACCATCAAGGAAGAAAATACTACCATAGTTCATCAATCTTTCTTCTTTACACCTGCTCACGTAGCTGCAATTCGTTGCTTAGTTCCACTCCATCTTCGTCAATGCACTACATTCGATCTTATCACTGCATGCTTTTGGTGTTGTCGAACAAAAGCATTGCAGTTAAAGCCAGAAGAAGAAGTACAAATGATGTGCATTATTAATGCACGTTCTAGGTTTAGTGCTAACCATTTGTCACTTGTTGGATATTATGGTAATTGTTTTGCTTTCCCAGCAGCTGTTACTACTGCTGGAAAGCTAATTTGTGGAAACCCATTAGGTTATGCAGTGGAATTGATAAAAAAAGCAAAAGCCCAAGTTACCGAAGAATACATGCATTCTTTGGCGGATTTTACCGTTATTAAAGAAAGATGTATATATAACACCATAAGGGCTTGTGTTGTATCAGACATGACTCGTGCTAAGTACAAAAATGTGAATTTCGGATGGGGTGAGGCCTTGTATGGTGGAGTGGTAAAAGGCGGGGCTGGACCGTTACCTGGAGCAACGTATATAATTCCACATAAGAATGCAAAAGAAGAAGAAGGTTTAATATTACTAACTTACTTGCCCTATGAAGATATGAAAAGGTTTGCTGAAGAGTTAGATAAGATGTTTGGGAACCAAAATCAACCTACAACGTGTGGTCCTAGTTTGGTGATGTCTGCTTTATAG 1386 0.3932 MTSSPMLKFRVQRCQPELVPPAAPTPHEIKLLSDIDNQECLRFNIPNIFIYPHQPSMTKKDPIKVLKHALSQTLVYYYPFAGRIREGAGGKLMVDCTGEGVMFIEAEADVTLDQFGDSLHPPFPWFQQLLDDVHGTQQIIDHPILLIQVTRLKCGGFILSIYCNHAIVDATGLKQFMNAWAEMARGAHQPSIQPIWQREFLMARNPPRVTCNHREYEQIILPPNTIKEENTTIVHQSFFFTPAHVAAIRCLVPLHLRQCTTFDLITACFWCCRTKALQLKPEEEVQMMCIINARSRFSANHLSLVGYYGNCFAFPAAVTTAGKLICGNPLGYAVELIKKAKAQVTEEYMHSLADFTVIKERCIYNTIRACVVSDMTRAKYKNVNFGWGEALYGGVVKGGAGPLPGATYIIPHKNAKEEEGLILLTYLPYEDMKRFAEELDKMFGNQNQPTTCGPSLVMSAL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05177 461 Gene3D - 216 439 IPR023213 -
Trre13g05177 461 Gene3D - 8 215 IPR023213 -
Trre13g05177 461 PANTHER ACYL TRANSFERASE 4 6 443 - -
Trre13g05177 461 Pfam Transferase family 11 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05177 Trre-Chr13 57256884 57259596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05177 18 439 Monolignol Biosynthesis Gene Families AT5G48930 28.146 1.20e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05177 K19861 - gmx:100792864 587.03