Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05159 ATGGTTCTTCATTTATTTCAAATGCTAAAAACTTCGGATTATGCGTCCGTAGTATCTATGAACCTATTTGTCGCATTGCTATGTGCTTGTATAGTCATTGGCCATCTTCTTGAGGAGAATCGATGGATTAACGAGTCTATCACCGCCCTTTTAATAGGTCTATGTACTGGTGTGGTGATTTTGTGGATAAGCAATTGTAAAAGCTCGCATCTACTTGTTTTTAGTGAAGATCTATTTTTTATATATCTTCTACCTCCCATCATCTTTAATGCCGGGTTTCAGGTGAAAAAGAAACGTTTTTTCGTTAATTTCATCACCATCATGATGTTTGGTGCTATTGGTACATTAATAAGTTGTAGCATCATATCTTTTGGTGTGACACAAATATTTAAGAGATTGGGTCTTGGTACCCTTGAGCTAGGGGAGGCTCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTGTGCACGTTGCAGGTGCTAAACCAGGATGAGACACCTTTACTATACAGCCTTGTGTTTGGTGAAGGTGTTGTGAATGATGCTACTTCAGTGGTTCTTTTCAATGCAATCAAAAGTTTTGATCTTGAACAACCAGGCCATGGAATTGCTTTGCAATTTTTTGGCAACTTCTTGTATTTGTTTATAGCAAGCACCATGCTTGGATTTTTGGGTGGTCTACTTAGTGCATACATTATCAAAAAACTCTATTTTGGAAGGCACTCGACTGATCGTGAGGTTGCTCTGATGATGCTAATGGCATACCTTACCTACATTTTGGCTGAATTATGGTTTCTTAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTAATGTCTCATTATACATGGCATAATGTGACTGAGAGCTCAAGAATCACTACCAAACATTCTTTTGCAACCCTGTCATTTGTTGCTGAGACATTTCTCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAGTTTTGTTAGTGATAGACCTGTAACATCTGTTAGTGTGAGTTCAGTATTATTAGCTCTAGTACTCGTTGGAAGAGCAGCATTTGTTTTCCCCTTATCCTTCTTAATCAACTTGTTTAAAAAGTCAGAAAATGATAAACTAAGCTTCAGCATGCAGGTAATCATTTGGTGGGCTGGTCTTATGAGAGGCGCTGTTTCAATGGCACTTGCCTATAATGAGTTTTCTAGTATATCTGGGCATGCGCATGCTCAATTCAATGCTACCATGATCACAAGTACCATCACTGTTGTGCTTGTCAGTACAATGGTGTTTGGTATGATGACAAAGCCACTAATAAGGTATTTACTACCTCTTCCTCCTCCAAAACGGAAAAACAGCACTGTGAGTCTTGATGAATCTGCTTCACCTTCACCAAAATCAATCACTGTGCCATTCCTTGGAGCTAACCATGATTCTGAAGTTGAAACTGATGCCACTGATTCTCAACGTCCGAGCAGCATTCGTGATTTACTCACCACACCAACACACACTGTCCATCGGTTATGGCGTAGGTTTGATGATGCATTTATGCGTCCGGTTTTTGGTGGTAGGGGTTTTGTTCCTTTTGTTCCTACCTCGCCAACCGAGTGCAGCGGTCATCCGAGTCCCGAATGGGAATGA 1635 0.4018 MVLHLFQMLKTSDYASVVSMNLFVALLCACIVIGHLLEENRWINESITALLIGLCTGVVILWISNCKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFVNFITIMMFGAIGTLISCSIISFGVTQIFKRLGLGTLELGEALAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLEQPGHGIALQFFGNFLYLFIASTMLGFLGGLLSAYIIKKLYFGRHSTDREVALMMLMAYLTYILAELWFLSGILTVFFCGIVMSHYTWHNVTESSRITTKHSFATLSFVAETFLFLYVGMDALDIEKWSFVSDRPVTSVSVSSVLLALVLVGRAAFVFPLSFLINLFKKSENDKLSFSMQVIIWWAGLMRGAVSMALAYNEFSSISGHAHAQFNATMITSTITVVLVSTMVFGMMTKPLIRYLLPLPPPKRKNSTVSLDESASPSPKSITVPFLGANHDSEVETDATDSQRPSSIRDLLTTPTHTVHRLWRRFDDAFMRPVFGGRGFVPFVPTSPTECSGHPSPEWE 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05159 544 MobiDBLite consensus disorder prediction 451 467 - -
Trre13g05159 544 Gene3D - 139 191 - -
Trre13g05159 544 PRINTS Na+/H+ exchanger signature 92 106 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre13g05159 544 PRINTS Na+/H+ exchanger signature 147 157 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre13g05159 544 PRINTS Na+/H+ exchanger signature 107 115 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre13g05159 544 PRINTS Na+/H+ exchanger signature 78 89 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre13g05159 544 MobiDBLite consensus disorder prediction 450 470 - -
Trre13g05159 544 Pfam Sodium/hydrogen exchanger family 24 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre13g05159 544 PANTHER SODIUM/HYDROGEN EXCHANGER 11 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05159 Trre-Chr13 57145876 57150847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05159 9 538 Antiporters AT3G05030 74.812 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05159 - - tpra:123890854 961.829