Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05108 ATGAATGGGAAGGTTAAAATCAGAGCTTCCGCCGGCCGGCGAACATGCAGTTCAGGGATCAACCGTCGTAGTTCCGGTACTCAGTGTTTTCGGAACCAAGCATCATCTTCGAGGGAAGAATGGATCGTCAGGGGCATAACCAAAATCCACCAATGTGGTCTGTTGGCTAGCAGCAACAGCATAACCAAAACCCACCAATGGGCGTTTCAACCAAACCAAATCACTGGGGCCCCAGGATCTGTTGTTACATCACTTGGTGGCATGCAATCCCCTGGTCGACCTGCTGGAGCTCAGTTGGGTCAGCATCAACTTGCTTATCAGCAACAGCTGCAAGCCTTTTGGGCAAACCAGTACCAAGAAATCAAAAAGGTTACTGAATTCAAGAACCACAGCCTCCCCTGGCAAGGATCAAGAAGATTACAAAGGCTGATGAGGATGTTAGAATGGTAA 450 0.4889 MNGKVKIRASAGRRTCSSGINRRSSGTQCFRNQASSSREEWIVRGITKIHQCGLLASSNSITKTHQWAFQPNQITGAPGSVVTSLGGMQSPGRPAGAQLGQHQLAYQQQLQAFWANQYQEIKKVTEFKNHSLPWQGSRRLQRLMRMLEW 149
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05108 Trre-Chr13 56825373 56828812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05108 110 145 CCAAT-HAP5 Transcription Factor Family AT1G56170 52.778 6.34e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05108 K08066 - gmx:100782754 83.1889