Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05107 ATGGATCGTCAGGGGCATAACCAAAATCCACCAATGTGGTCTGTTGGTAGCGCAGATCAATGGCCATTTGGATTTATCCTGTGTCAACTAAACCTAATTACTGGGGCATCTGTATCAGGTGTTAGATCAGTTGGGGGAATGCACACCACTGGATCTGTTGTTACATCACTTGGTGGCATGCAATCCCCTGGTCGACCTGCTGGAGCTCAGTTGGGTCAGCATCAACTTGCTTATCAGCAACAGCTGCAAGCCTTTTGGGCAAACCAGTACCAAGAAATCAAAAAGGTTACTGAATTCAAGAACCACAGCCTCCCCTGGCAAGGATCAAGAAGATTACAAAGGCTGATGAGGATGTTAGAATGGTTCCAAGCCAACCAGTTTTATTCACACAAGCAAGACACAACTTTATTGTATTTCGCACTGTCTCTGAGAGAGGTAATCACTGTTTTCGGAACCAAGCTTCATCTGTGA 471 0.4544 MDRQGHNQNPPMWSVGSADQWPFGFILCQLNLITGASVSGVRSVGGMHTTGSVVTSLGGMQSPGRPAGAQLGQHQLAYQQQLQAFWANQYQEIKKVTEFKNHSLPWQGSRRLQRLMRMLEWFQANQFYSHKQDTTLLYFALSLREVITVFGTKLHL 156
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05107 Trre-Chr13 56825341 56826299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05107 82 120 CCAAT-HAP5 Transcription Factor Family AT1G56170 51.282 1.18e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05107 K08066 - vvi:100258035 95.9005