Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05095 ATGTTTTTAGATAATTCATCGGAGCAATTGAACGAAACCTCTGAAAACATGGATGAGAATACTTTGTCCAGTGGTCAGGGTGATACTCTCCCAATATTGAAGAAAATTATTGACCTAAGTACCAAAGCTCAGACCTTGAAGAGAGAACATGTTTCTCTTAGTGATCAAGTGAAACTCACATTTGAGTCCTTTCCTGGTCTGGATGTTTTAAAGTCTGTTCGGCTTTTGGGTGCTGAATATGAAATTTTGAAAAGAAAGTACCTAGAGGAGTCACTTGAGCGTAGGCGGCTTAACAATGAAGTGATAGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCGTTAAATGAAAATGAAATTGCTAATGGATCAGCGGTATCTGTTGTCAATTTTGAGTCAGCTTCTGAGGAGCTTCAAGTTATTTGCTCAGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTCAAACCTGAAGATAATCAAGAGGCTGTTTTTGCACAAACAAAACCTATTGTTGCTTCAGTTTTAGATGGATATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGTAAGACTTTTACCATGGAAGGAACACCAGAGCATCGTGGAGTTAACTATAGAACCCTTGAGGAATTATTTCAGATTTCTGAAGATAGACAAGGCATGATGAAATATGAATTGCATGTTAGCATGTTGGAGGTTTATAATGAAAAGATAAAAGATCTCTTGGCCGGAAATCCTTCTGAAGCCACTAAGAAGTTGGAAGTAAAGCAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTTGTTGAAACTCGTGTTTATGGAGCAGATGGTGTTTGGGAAATTCTGAAGTCTGGAAATAGAGTCAGATCAGTTGGTTCCACAAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGGTACGGGTAACTGTTGTGGGGGAGAATTTAATCAATGGCCAGAGAACAAAAAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTAGGAAAAACTGATGCTGAAGGAGAAAGGCTGAAGGAATCTCAATTCATAAATAAGTCTCTATCAGCACTTGGTGATGTTATTGCAGCACTTGCTTCCAAATCAGCCCACATTCCTTATAGGAACTCAAAGCTCACTCAAATACTTCAGAGCTCGTTAGGAGGTGATTGCAAAACTCTAATGTTTCTCCAAATAAGTCCTAGTTCGGTGGACTTAACAGAGACGCTTTGCTCGCTGAATTTTGCCACGCGTGTTCGAGGAATTGAGGGTGGCCCACCCCGCAAACAAGTAGACCTTGCTGAGCTTATGAAGTACAAGCAAATGGCTGAAAAGTCCAAACACGATGAAAAGGAAGTTAGGAAATTACAAGATAACTTGCAGTCGGTACAAATGAAACTAACCGCAAGAGAACTCATGTGCCGAAATCTTCAAGACAAGGTTCGGAATCTAGAGAACCAGATTGCAGAGGAGAGAAAAGCCAGATTAAACCAAGAAAGTCGATCACTTGCTACCGAGAATACCAAAAAGAGGACATCACTGATTCCTTTGCCAAGACCCCCATTAAGAAGAATTAATAACTCCTTGCCTCCACCAGCTGAGAGAAGGCCCTCCTCATGCAACTCTTCCTTAATTGGAAAGGAAAACATTGCTAGAACGACCTCAATGACTACAAGAAGAAGGGTGTCCGTTGCTACAAAACCACCAGCTGCACCGTCACAAACACAACCCCTTCAACCTAGGAGGCGAGTTTCCCTGGCAACATTTCATCCTGAAACAACTTCTGATGCCACAACTTCACTCCACACCTCTGCTTCTCAATTCATTAGTGGAAGCAATGTTCACCAATCAATGATAAGGAGGAACAATAGGAAAGCTCGGTATTCAAGTTTGTTCACCCCGACAACATCAACAATCGAGACAACACCCTCTTTGGATAAGAGCCGGAGTAGGTTTGCTGGCAGTCCAACACAGGCAGCAGATTCACGGATGATGGCTAGACATCCACACCCATCTGTGATTGCACTGCAACGCAAACCTTTGGTATGGAGTCCTCTCAAGTGGAGAAGAGGCGTAGAAAGTAGCAGAAAGTCATCAATCTTGCCATCTCAGCCTTCCACCCCAATGCGATGGAGTCCTCTCAAGTGGAGAAGAGGCTTAGAAAGTAGCAGAAAGTCATCAATCTTGCCATCTCAGCCTGCCACCCAAATGCGATGA 2244 0.4234 MFLDNSSEQLNETSENMDENTLSSGQGDTLPILKKIIDLSTKAQTLKREHVSLSDQVKLTFESFPGLDVLKSVRLLGAEYEILKRKYLEESLERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFESASEELQVICSDSSKKQFKFDHVFKPEDNQEAVFAQTKPIVASVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFQISEDRQGMMKYELHVSMLEVYNEKIKDLLAGNPSEATKKLEVKQAADGTQEVPGLVETRVYGADGVWEILKSGNRVRSVGSTSANELSSRSHCLVRVTVVGENLINGQRTKSHLWLVDLAGSERVGKTDAEGERLKESQFINKSLSALGDVIAALASKSAHIPYRNSKLTQILQSSLGGDCKTLMFLQISPSSVDLTETLCSLNFATRVRGIEGGPPRKQVDLAELMKYKQMAEKSKHDEKEVRKLQDNLQSVQMKLTARELMCRNLQDKVRNLENQIAEERKARLNQESRSLATENTKKRTSLIPLPRPPLRRINNSLPPPAERRPSSCNSSLIGKENIARTTSMTTRRRVSVATKPPAAPSQTQPLQPRRRVSLATFHPETTSDATTSLHTSASQFISGSNVHQSMIRRNNRKARYSSLFTPTTSTIETTPSLDKSRSRFAGSPTQAADSRMMARHPHPSVIALQRKPLVWSPLKWRRGVESSRKSSILPSQPSTPMRWSPLKWRRGLESSRKSSILPSQPATQMR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05095 747 PRINTS Kinesin heavy chain signature 301 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 PRINTS Kinesin heavy chain signature 381 402 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 PRINTS Kinesin heavy chain signature 181 202 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 PRINTS Kinesin heavy chain signature 332 350 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 MobiDBLite consensus disorder prediction 705 719 - -
Trre13g05095 747 MobiDBLite consensus disorder prediction 642 674 - -
Trre13g05095 747 ProSitePatterns Kinesin motor domain signature. 331 342 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre13g05095 747 MobiDBLite consensus disorder prediction 733 747 - -
Trre13g05095 747 Gene3D Kinesin motor domain 102 475 IPR036961 -
Trre13g05095 747 Coils Coil 80 100 - -
Trre13g05095 747 ProSiteProfiles Kinesin motor domain profile. 107 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 466 IPR027417 -
Trre13g05095 747 MobiDBLite consensus disorder prediction 703 747 - -
Trre13g05095 747 PANTHER KINESIN-LIKE PROTEIN KLP-3 34 577 IPR027640 GO:0003777|GO:0007018
Trre13g05095 747 Pfam Kinesin motor domain 113 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 SMART kinesin_4 105 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05095 747 MobiDBLite consensus disorder prediction 1 26 - -
Trre13g05095 747 MobiDBLite consensus disorder prediction 505 592 - -
Trre13g05095 747 FunFam Kinesin-like protein 102 471 - -
Trre13g05095 747 MobiDBLite consensus disorder prediction 642 666 - -
Trre13g05095 747 MobiDBLite consensus disorder prediction 541 592 - -
Trre13g05095 747 Coils Coil 448 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05095 Trre-Chr13 56763313 56766922 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05095 78 452 Calmodulin-binding Proteins AT5G65930 42.021 3.81e-77 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05095 K10406 - gmx:100788477 929.858