Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05093 ATGCTTACAGAAAAATTCAACCGATTCGTCATTCACACTAATTTCAACTCCGAACCAGATAATTCATCAGAGCAATTGAACGAAACCTCTGAAAACATGGATGAAAATACTTCGTCCAGCGAAGTCAATGAAATTTCTCCTCAACAGGATCATACTCTACCAATACTAAAGAAAATTATTGACCTTAGTACCAAAGCTCAGACCTTGAAGAGAGAACATGTTTCTCTTAGTGATCAAGTGAAACTCACATTTGAGTCATTTCCTGGTCTGGATGTTTTAAAGTCTGTTCGGCTTTTGGGTGCTGAATATGAAATTTTGAAAAGAAAGTACCTAGAGGAGTCACTTGAGCGTAGGCGGCTTAACAATGAAGTGATAGAACTCAAGGGAAATATCAGAGTTTTCTGCAGATGCAGACCGTTAAATGAAAATGAAATTGCTAATGGATCAGCGGTTTCTGTTGTCAATTTTGAGTCAGCTTCCGAGGAGCTTCAAGTTATTTGCTCAGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTCAAACCTGAAGATAATCAAGAGGCTGTTTTTACACAAACAAAACCTATTGTTGCTTCAGTTTTAGATGGATATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACTGGCAAGACTTTTACCATGGAGGGAACACCAGAGCATCGTGGAGTTAACTATAGAAGCCTTGAGGAATTATTTCGGATTTCTCAAAATAGACAAGGCACGATGAAATATGAATTGCATGTTAGTATGCTCGAAGTTTACAATGAAAAGATAAAAGATCTCTTGGCCGGAAATCCTTCTGAAGCCACTAAGAAGTTGGAAGTAAAGCAGGCTGCGGATGGGACCCAAGAAGTCCCAGGACTTGTTGAAACTCGTGTTTATGGAGCAGATGGTGTTTGGGAAATCCTGAAATCTGGAAACAGAGTCAGATCAGTTGGTTCCACAAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGGTGCGGGTAACTGCCGTGGGGGAGAATTTAATCAATAGCCAGAGAACAAAAAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGTGTAGGGAAAACTGATGCTGAAGGAGAAAGGCTGAAGGAATCTCAATTCATAAATAAGTCTCTATCAGCACTTGGTGATGTTATTGCAGCACTTGCTTCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACTCATATACTTCAGAGCTCGTTAGGAGGTGATTGCAAAACTCTAATGTTTGTCCAAATAAGTCCTAGTTCGGTGGACTTAACAGAGACGCTTTGCTCGCTGAATTTTGCCACGCGTGTTCGAGGAATTGAGAGCGGCCCAGCCCGCAAACAAGTAGACCTCGCTGAGCTTATGAAGTACAAGCAATTGGCTGAAAAGTCCAAACACGATGAGAAGGAAGTTAGGAAATTACAAGATAACTTGCAATCAGTGCAAATGAAATTAACCGCAAGAGAACTCATGTGCCGAAATCTTCAAGACAAGGTTCGGAATCTAGAGAACCAGATTGCAGAGGAGAAAAAAGCCAGATTAAACCAAGAAAGTAGATCACTTGCTACCGAGAATACCAAAAAGAGGACATCAATGATTCCTTTGGTAAGACCCCCATTAAGAAGAATTAATAATTCCTTGCCTCCACCACCCGAGAGAAGGCCCTCCTCATGCAACTCTTCCTTAATTGGAAAGGAAAACATTGCCAGAACGACCTCAATGACTACAAAAAGAAGGGTGTCCGTTGCTACAAAACCACCAGCTGCACCGTCACAAACACAACCCCTTCAACCTAGGAGGCGAGTTTCCCTGGCAACATTTCATCCTGAAACAACTTCTGATGCCACAACTTCACTCCATACCTCTGCTTCTCAATTCATTAGTGGAAGCAATGTTCACCAATCAATGATAAGGAGGAACAATAGGAAAGCTCGGTATTCAAGTTTGTTCACCCCGACAACATCAGCAATTGAGACAACGCCCACTTTGGATAAGAGCCGCAGTAGGTTTGCTGGCAGTCCAATACAGGCAGCAGATTCACGGATGATGGCTAGACATCCACACCCAACTGTGATTGCACTGCAACGCAAACCTTTGGTATGGAGTCCTCTCAAGTGGAGAAGAGGCGTTGAAAGTAGCAGAAAGTCATCAATCTTGCCATCTCGGCCTTCCACCCAAATGCGATGA 2229 0.4208 MLTEKFNRFVIHTNFNSEPDNSSEQLNETSENMDENTSSSEVNEISPQQDHTLPILKKIIDLSTKAQTLKREHVSLSDQVKLTFESFPGLDVLKSVRLLGAEYEILKRKYLEESLERRRLNNEVIELKGNIRVFCRCRPLNENEIANGSAVSVVNFESASEELQVICSDSSKKQFKFDHVFKPEDNQEAVFTQTKPIVASVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRSLEELFRISQNRQGTMKYELHVSMLEVYNEKIKDLLAGNPSEATKKLEVKQAADGTQEVPGLVETRVYGADGVWEILKSGNRVRSVGSTSANELSSRSHCLVRVTAVGENLINSQRTKSHLWLVDLAGSERVGKTDAEGERLKESQFINKSLSALGDVIAALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSVDLTETLCSLNFATRVRGIESGPARKQVDLAELMKYKQLAEKSKHDEKEVRKLQDNLQSVQMKLTARELMCRNLQDKVRNLENQIAEEKKARLNQESRSLATENTKKRTSMIPLVRPPLRRINNSLPPPPERRPSSCNSSLIGKENIARTTSMTTKRRVSVATKPPAAPSQTQPLQPRRRVSLATFHPETTSDATTSLHTSASQFISGSNVHQSMIRRNNRKARYSSLFTPTTSAIETTPTLDKSRSRFAGSPIQAADSRMMARHPHPTVIALQRKPLVWSPLKWRRGVESSRKSSILPSRPSTQMR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g05093 742 Coils Coil 471 538 - -
Trre13g05093 742 SMART kinesin_4 128 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 Pfam Kinesin motor domain 136 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 ProSiteProfiles Kinesin motor domain profile. 130 454 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 MobiDBLite consensus disorder prediction 552 615 - -
Trre13g05093 742 Gene3D Kinesin motor domain 125 498 IPR036961 -
Trre13g05093 742 PANTHER KINESIN-LIKE PROTEIN KLP-3 26 604 IPR027640 GO:0003777|GO:0007018
Trre13g05093 742 MobiDBLite consensus disorder prediction 570 615 - -
Trre13g05093 742 PRINTS Kinesin heavy chain signature 404 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 PRINTS Kinesin heavy chain signature 204 225 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 PRINTS Kinesin heavy chain signature 355 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g05093 742 ProSitePatterns Kinesin motor domain signature. 354 365 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre13g05093 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 488 IPR027417 -
Trre13g05093 742 Coils Coil 103 123 - -
Trre13g05093 742 MobiDBLite consensus disorder prediction 14 47 - -
Trre13g05093 742 FunFam Kinesin-like protein 125 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g05093 Trre-Chr13 56754127 56757971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05093 101 475 Calmodulin-binding Proteins AT5G65930 42.553 3.43e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05093 K10406 - gmx:100788477 947.577