Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g05082 ATGTCCATATCCATGTCTCATTCCAATTCCAGATACAATGGCCTAGTGGAATCTGCTCTTACTAGCTCTAAGGTGGTGAAGGGGAAAAGTGGTTCAATTGAATATTGCTATTTTGGGGATAGCCTTAAGTTAGACGAGTTAGACAGTAATTTCCGGGCGAATTTGACCTCTACTGGGTTCGATTTAAGTGATATTTCTGATGGTTCAAACGATGCCAAAATGAAAGGATTCATTAATCTTTTGATGTGGTGTTTTCACCACCCAAGATCCAGTGTTTTACTCATAAGAAATTATAATAACTATCGAGACTGCATAGTGGAACTTGATGGTTTGAGGTTTCAAATGATGTTTGCCTATGTCGATCCGATAGATGAACCTACACGGAGATTGCTTGAAGCCTCTCCCAATACCGTGGTCTGGAGTCTTGGTACTCTCTTGAACGGAGAACCTCCCTTAACTGAAAAGGAGTTACGTCTGCTTAACCCGCCTCCGCTGCAGCTGCAAAACAAAAAAAGGAAAAATTCAGTAAGAGGATGA 537 0.4115 MSISMSHSNSRYNGLVESALTSSKVVKGKSGSIEYCYFGDSLKLDELDSNFRANLTSTGFDLSDISDGSNDAKMKGFINLLMWCFHHPRSSVLLIRNYNNYRDCIVELDGLRFQMMFAYVDPIDEPTRRLLEASPNTVVWSLGTLLNGEPPLTEKELRLLNPPPLQLQNKKRKNSVRG 178
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre13g05082 Trre-Chr13 56694410 56695006 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g05082 20 170 C2H2 Transcription Factor Family AT5G61190 26.115 9.78e-06 43.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g05082 - K25423 pvir:120694628 44.669