Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04984 ATGGCAAGTGTTGCTAGTTTCATTCCATTAATATTAATGTTTCTCATTCAATTAGCTTATGCTGGAATGAATATTACCTCAAAGCTTGCTATTCTAGGTGGCATGAACCCTCTTATCCTTGTTGCTTACCGTCAAATCTTTGGAACTATAGCCATTGCTCCCTTTGCATATTTTCTTGAACGGGATATGGTTCCAAGGATGACAAAGCGCATTATGGTTCAAATTTTAATATCTTCCTTAACAGGAGTAACAGGAAATCAGGTTCTATATTTCGTGGGTCTAAAGTATGCATCAGCAACAGTTGCATGTGCACTCACCAATTTACTCCCAGCTTTTACATTTGTCCTTGCAATCTTATTCAGACAAGAGAGTTTGGGAATAAAAAGGAAAAGTGGTATAGCAAAGGTAGTAGGAACATGTTTGTGTGTTGGTGGAGCAATATTTTTATCATTTTACCATGGAGAAGCGATTGGTATTGGTGATTCAAAAATTCATTGGAGTTATGCTGATAAAATTGAAGGTGGTGATACCTCCACTGCTGCTTCCCGAACCACTCTTGTAGGCCCTATTGCCTTAAGTCTTAGTGCTCTTATTTGGGCAGCATGGTTCATACTTCAAGCAGATATGAGCAGGAATTTTCCAGTACCTTATACAAGCACAGCATACATGTTATTCTTAGCAAGTTTTCAATGTGTGATCATTGCATTGTTTTTTGATCATAGTGTCTCATCTTGGTCACTTGTTGATGCTATGAGACTTACCTCTTCTCTTTATGCGGGAGTAATTTGCACTGGGCTGACATATTGTATAATATCATGGACCATTGAGAGAAAAGGGCCTGTTTATGTCTCTGTATTTAGCCCCATGCAGCTTATCATCACAGCTGTCATTAGCTGGGCTTTTCTGAGGGAGAAATTATACCTTGGAACGGCCATAGGGTCTGTTCTGATAGTTGGTGGTCTATATGCTGTTTTGTGGGGAAAGAGCAAAGAGGTGGATAGCAACAAAGTGGACGATGCTACTGATGATGATGAAGCATTGCCACAAGGAATTAAGAAGATTAATGATATGGAATTACAATCTTATATACCATCCAATGGTAACGGCCACAAATGA 1116 0.3907 MASVASFIPLILMFLIQLAYAGMNITSKLAILGGMNPLILVAYRQIFGTIAIAPFAYFLERDMVPRMTKRIMVQILISSLTGVTGNQVLYFVGLKYASATVACALTNLLPAFTFVLAILFRQESLGIKRKSGIAKVVGTCLCVGGAIFLSFYHGEAIGIGDSKIHWSYADKIEGGDTSTAASRTTLVGPIALSLSALIWAAWFILQADMSRNFPVPYTSTAYMLFLASFQCVIIALFFDHSVSSWSLVDAMRLTSSLYAGVICTGLTYCIISWTIERKGPVYVSVFSPMQLIITAVISWAFLREKLYLGTAIGSVLIVGGLYAVLWGKSKEVDSNKVDDATDDDEALPQGIKKINDMELQSYIPSNGNGHK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04984 371 PANTHER WAT1-RELATED PROTEIN 9 332 IPR030184 GO:0016020|GO:0022857
Trre13g04984 371 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
Trre13g04984 371 Pfam EamA-like transporter family 8 147 IPR000620 GO:0016020
Trre13g04984 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 149 - -
Trre13g04984 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04984 Trre-Chr13 55988233 55992343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04984 8 369 Nodulin-like Gene Family AT1G09380 54.121 3.46e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04984 - - gmx:100801512 493.041