Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04958 ATGGTGAAACTTTTCTGGGTTGGCATAGCAACAGGACTTGTTTTCACCAACTTGGTTTATGGGTTTGTAGGATATGATCAATATCACTTCAATGAAACTGAAGAACTCTTTCTGTTAGAGGCTCATGAACATGAATCATTATATTCATCATCTTTGCTTGAGGGAAATGGAAATCCTCTACTTGTAGGACTCACCCTTATCCACAATGCAGCTTCTAAAGGAGCAGTGTGCTTGGATGGAACATTACCTGGTTACCATCTGCATCGTGGATATGGATCAGGAGCAAACAGTTGGCTAGTTAATTTAGAGGGAGGTGGATGGTGTAACAATGTTAGAACATGCGTTTATCGCAAGAAAACACGGCGTGGATCATCATTATTCATGGAAAAAGAGATACCATTCACAGGAATACTGAGTAATAAACCTGAAGAAAATCCAGATTTTTTCAATTGGAATAGAGTGAAACTTCGTTATTGCGACGGTGGCTCATTTGCTGGGGATGGTGAAGATCAGGGTGCAGAACTGCAATTCAGAGGACAACGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGTGTTTCGCTAATCAGGCTCTTCTTTCCGGATGTTCTGCGGGTGGCCTAGCTACTATTATACACTGCGATGAATTTCGAGGTCTCTTTCCAAGGACTATTAAAGTGAAATGTCTAAGCGACGCAGGGTTGTTTCTTGATTCGATTGATATATCTGGCGAACGGACCCTCCGGAATATGTACAATGGTGTTGTAGGGTTGCAGGAAGCACAGAAAAATCTACCACAAATTTGTACTAATCACCTTGATCCTACCTCGTGCTTCTTCCCTCAGAATTTGATTGCCAGTGTTAGAACACCGCTTTTTCTTCTTAATACAGCTTATGATTCATGGCAGATCCAGTCAAGTTTAGCTCCTCCATCAGCAGATCCACATGGTTATTGGCATGATTGCAGATTAAATTTTGCTAAATGTACTAGGCCGCAAATCCAATTTCTGCAAGGATTCAGGAATCACATGTTGAACTCTATTAAAGACTTCTCAAGATCAAACAAAAATGGATTGTTTATTAATTCGTGTTTCGCTCACTGCCAAACCGAGAGGCAGGATACATGGTTTTCGGACAATTCTCCGGTTATTGGGAACAAGGTAATTGCTTTAGCTGTTGGAGACTGGTATTTCGACCGAGCAGGTGTTAAGGTCATTGATTGTCCATACCCTTGTGATAATACATGTCATCATCTGGTTTTCAGTTGA 1278 0.4116 MVKLFWVGIATGLVFTNLVYGFVGYDQYHFNETEELFLLEAHEHESLYSSSLLEGNGNPLLVGLTLIHNAASKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEGGGWCNNVRTCVYRKKTRRGSSLFMEKEIPFTGILSNKPEENPDFFNWNRVKLRYCDGGSFAGDGEDQGAELQFRGQRIWAAAMEDLMSKGMCFANQALLSGCSAGGLATIIHCDEFRGLFPRTIKVKCLSDAGLFLDSIDISGERTLRNMYNGVVGLQEAQKNLPQICTNHLDPTSCFFPQNLIASVRTPLFLLNTAYDSWQIQSSLAPPSADPHGYWHDCRLNFAKCTRPQIQFLQGFRNHMLNSIKDFSRSNKNGLFINSCFAHCQTERQDTWFSDNSPVIGNKVIALAVGDWYFDRAGVKVIDCPYPCDNTCHHLVFS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04958 425 Pfam Pectinacetylesterase 60 404 IPR004963 GO:0016787
Trre13g04958 425 PANTHER NOTUM-RELATED 60 421 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04958 Trre-Chr13 55708155 55710936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04958 61 424 Carbohydrate Esterase AT1G57590 72.802 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04958 K19882 - gmx:100788448 729.554